Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF923 and GFF924 are separated by 245 nucleotides GFF924 and GFF925 overlap by 4 nucleotides GFF925 and GFF926 are separated by 129 nucleotides
GFF923 - hypothetical protein, at 994,882 to 995,703
GFF923
GFF924 - Glutamyl-tRNA(Gln) amidotransferase subunit A, at 995,949 to 997,433
GFF924
GFF925 - Glutamyl-tRNA(Gln) amidotransferase subunit C, at 997,430 to 997,717
GFF925
GFF926 - Putative pre-16S rRNA nuclease, at 997,847 to 998,365
GFF926
Position (kb) 995
996
997
998 Strain fitness (log2 ratio) -2
-1
0
1
2 at 995.017 kb on + strand, within GFF923 at 995.018 kb on - strand, within GFF923 at 995.018 kb on - strand, within GFF923 at 995.095 kb on + strand, within GFF923 at 995.095 kb on + strand, within GFF923 at 995.095 kb on + strand, within GFF923 at 995.095 kb on + strand, within GFF923 at 995.095 kb on + strand, within GFF923 at 995.099 kb on + strand, within GFF923 at 995.278 kb on + strand, within GFF923 at 995.279 kb on - strand, within GFF923 at 995.279 kb on - strand, within GFF923 at 995.279 kb on - strand, within GFF923 at 995.397 kb on - strand, within GFF923 at 995.440 kb on + strand, within GFF923 at 995.440 kb on + strand, within GFF923 at 995.440 kb on + strand, within GFF923 at 995.504 kb on - strand, within GFF923 at 995.709 kb on + strand at 995.709 kb on + strand at 995.709 kb on + strand at 995.709 kb on + strand at 995.709 kb on + strand at 995.709 kb on + strand at 995.710 kb on - strand at 995.710 kb on - strand at 995.710 kb on - strand at 995.712 kb on - strand at 995.712 kb on - strand at 995.712 kb on - strand at 995.712 kb on - strand at 995.713 kb on + strand at 995.713 kb on + strand at 995.713 kb on + strand at 995.713 kb on + strand at 995.714 kb on - strand at 995.714 kb on - strand at 995.714 kb on - strand at 995.886 kb on + strand at 995.886 kb on + strand at 995.887 kb on - strand at 995.887 kb on - strand at 995.889 kb on + strand at 995.889 kb on + strand at 995.889 kb on + strand at 995.890 kb on - strand at 995.890 kb on - strand at 995.890 kb on - strand at 995.890 kb on - strand at 995.890 kb on - strand at 995.890 kb on - strand at 995.890 kb on - strand at 995.890 kb on - strand at 995.890 kb on - strand at 995.946 kb on - strand at 997.747 kb on - strand at 997.749 kb on - strand at 997.749 kb on - strand at 997.824 kb on - strand at 997.835 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 995,017 + GFF923 0.16 +0.7 995,018 - GFF923 0.17 +0.0 995,018 - GFF923 0.17 -0.5 995,095 + GFF923 0.26 -1.3 995,095 + GFF923 0.26 -0.5 995,095 + GFF923 0.26 -1.3 995,095 + GFF923 0.26 -0.8 995,095 + GFF923 0.26 -1.4 995,099 + GFF923 0.26 -1.1 995,278 + GFF923 0.48 +0.5 995,279 - GFF923 0.48 +0.3 995,279 - GFF923 0.48 -1.3 995,279 - GFF923 0.48 -1.4 995,397 - GFF923 0.63 +0.6 995,440 + GFF923 0.68 +0.2 995,440 + GFF923 0.68 +0.5 995,440 + GFF923 0.68 +0.6 995,504 - GFF923 0.76 -1.5 995,709 + -1.4 995,709 + -0.1 995,709 + -0.1 995,709 + -1.8 995,709 + +0.7 995,709 + -0.4 995,710 - +0.5 995,710 - -0.1 995,710 - -0.6 995,712 - -1.4 995,712 - +0.9 995,712 - -0.7 995,712 - +0.7 995,713 + -0.8 995,713 + -0.0 995,713 + -1.8 995,713 + +0.2 995,714 - +0.7 995,714 - -0.1 995,714 - +0.3 995,886 + -0.2 995,886 + -1.0 995,887 - +0.8 995,887 - -0.8 995,889 + -1.1 995,889 + +0.3 995,889 + +1.2 995,890 - +0.5 995,890 - +1.1 995,890 - +0.3 995,890 - -1.1 995,890 - +0.1 995,890 - -1.5 995,890 - +2.0 995,890 - -0.7 995,890 - +0.8 995,946 - -1.0 997,747 - +0.2 997,749 - -1.2 997,749 - -1.1 997,824 - +0.3 997,835 + -0.5
Or see this region's nucleotide sequence