Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF917 and GFF918 are separated by 153 nucleotides GFF918 and GFF919 are separated by 14 nucleotides GFF919 and GFF920 are separated by 99 nucleotides
GFF917 - hypothetical protein, at 987,454 to 988,782
GFF917
GFF918 - Chorismate synthase, at 988,936 to 990,051
GFF918
GFF919 - hypothetical protein, at 990,066 to 990,839
GFF919
GFF920 - hypothetical protein, at 990,939 to 991,595
GFF920
Position (kb) 988
989
990
991 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 987.938 kb on + strand, within GFF917 at 987.939 kb on - strand, within GFF917 at 987.939 kb on - strand, within GFF917 at 987.939 kb on - strand, within GFF917 at 988.098 kb on + strand, within GFF917 at 988.098 kb on + strand, within GFF917 at 988.445 kb on + strand, within GFF917 at 988.445 kb on + strand, within GFF917 at 988.445 kb on + strand, within GFF917 at 988.445 kb on + strand, within GFF917 at 988.445 kb on + strand, within GFF917 at 988.445 kb on + strand, within GFF917 at 988.445 kb on + strand, within GFF917 at 988.445 kb on + strand, within GFF917 at 988.445 kb on + strand, within GFF917 at 988.446 kb on - strand, within GFF917 at 988.446 kb on - strand, within GFF917 at 988.446 kb on - strand, within GFF917 at 988.446 kb on - strand, within GFF917 at 988.446 kb on - strand, within GFF917 at 988.470 kb on + strand, within GFF917 at 988.470 kb on + strand, within GFF917 at 988.470 kb on + strand, within GFF917 at 988.470 kb on + strand, within GFF917 at 988.470 kb on + strand, within GFF917 at 990.523 kb on - strand, within GFF919 at 990.751 kb on - strand, within GFF919 at 990.837 kb on + strand at 990.838 kb on - strand at 990.907 kb on + strand at 990.907 kb on + strand at 990.907 kb on + strand at 990.907 kb on + strand at 990.907 kb on + strand at 990.908 kb on - strand at 990.984 kb on + strand at 990.984 kb on + strand at 990.984 kb on + strand at 990.985 kb on - strand at 990.985 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 987,938 + GFF917 0.36 -1.0 987,939 - GFF917 0.36 -0.7 987,939 - GFF917 0.36 -0.7 987,939 - GFF917 0.36 -1.5 988,098 + GFF917 0.48 -2.9 988,098 + GFF917 0.48 -1.7 988,445 + GFF917 0.75 -2.7 988,445 + GFF917 0.75 -0.0 988,445 + GFF917 0.75 +1.9 988,445 + GFF917 0.75 -1.2 988,445 + GFF917 0.75 -0.4 988,445 + GFF917 0.75 -2.1 988,445 + GFF917 0.75 -0.7 988,445 + GFF917 0.75 -2.0 988,445 + GFF917 0.75 -2.9 988,446 - GFF917 0.75 +0.1 988,446 - GFF917 0.75 -1.9 988,446 - GFF917 0.75 -0.9 988,446 - GFF917 0.75 -0.3 988,446 - GFF917 0.75 -1.1 988,470 + GFF917 0.76 -0.8 988,470 + GFF917 0.76 -0.8 988,470 + GFF917 0.76 -1.9 988,470 + GFF917 0.76 -0.4 988,470 + GFF917 0.76 -0.9 990,523 - GFF919 0.59 -0.6 990,751 - GFF919 0.89 -0.9 990,837 + -0.9 990,838 - -0.4 990,907 + +2.5 990,907 + -1.8 990,907 + -1.6 990,907 + +0.5 990,907 + +1.1 990,908 - -0.8 990,984 + +0.4 990,984 + -1.8 990,984 + +1.1 990,985 - +1.4 990,985 - -1.9
Or see this region's nucleotide sequence