Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF8 and GFF9 are separated by 103 nucleotides GFF9 and GFF10 are separated by 172 nucleotides
GFF8 - DNA-directed RNA polymerase subunit beta, at 5,439 to 9,515
GFF8
GFF9 - DNA-directed RNA polymerase subunit beta', at 9,619 to 13,803
GFF9
GFF10 - Putrescine importer PuuP, at 13,976 to 15,322
GFF10
Position (kb) 9
10
11
12
13
14 Strain fitness (log2 ratio) -2
-1
0
1 at 9.589 kb on + strand at 13.927 kb on + strand at 13.927 kb on + strand at 13.928 kb on - strand at 13.941 kb on + strand at 14.195 kb on + strand, within GFF10 at 14.195 kb on + strand, within GFF10 at 14.195 kb on + strand, within GFF10 at 14.195 kb on + strand, within GFF10 at 14.195 kb on + strand, within GFF10 at 14.196 kb on - strand, within GFF10 at 14.196 kb on - strand, within GFF10 at 14.201 kb on + strand, within GFF10 at 14.201 kb on + strand, within GFF10 at 14.201 kb on + strand, within GFF10 at 14.202 kb on - strand, within GFF10 at 14.202 kb on - strand, within GFF10 at 14.202 kb on - strand, within GFF10 at 14.202 kb on - strand, within GFF10 at 14.202 kb on - strand, within GFF10 at 14.202 kb on - strand, within GFF10 at 14.202 kb on - strand, within GFF10 at 14.203 kb on + strand, within GFF10 at 14.264 kb on + strand, within GFF10 at 14.264 kb on + strand, within GFF10 at 14.265 kb on - strand, within GFF10 at 14.265 kb on - strand, within GFF10 at 14.341 kb on + strand, within GFF10 at 14.411 kb on - strand, within GFF10 at 14.471 kb on + strand, within GFF10 at 14.717 kb on + strand, within GFF10 at 14.718 kb on - strand, within GFF10 at 14.718 kb on - strand, within GFF10 at 14.718 kb on - strand, within GFF10 at 14.801 kb on + strand, within GFF10 at 14.802 kb on - strand, within GFF10
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 9,589 + -0.1 13,927 + -0.2 13,927 + +0.5 13,928 - +0.3 13,941 + -1.6 14,195 + GFF10 0.16 +0.8 14,195 + GFF10 0.16 +0.2 14,195 + GFF10 0.16 -1.3 14,195 + GFF10 0.16 -0.1 14,195 + GFF10 0.16 +0.6 14,196 - GFF10 0.16 +0.0 14,196 - GFF10 0.16 -1.2 14,201 + GFF10 0.17 -0.1 14,201 + GFF10 0.17 -1.3 14,201 + GFF10 0.17 +1.6 14,202 - GFF10 0.17 -0.0 14,202 - GFF10 0.17 -0.1 14,202 - GFF10 0.17 -2.2 14,202 - GFF10 0.17 -0.6 14,202 - GFF10 0.17 -0.4 14,202 - GFF10 0.17 +0.3 14,202 - GFF10 0.17 -0.1 14,203 + GFF10 0.17 -0.0 14,264 + GFF10 0.21 -0.0 14,264 + GFF10 0.21 -1.1 14,265 - GFF10 0.21 -1.2 14,265 - GFF10 0.21 +0.6 14,341 + GFF10 0.27 -0.6 14,411 - GFF10 0.32 -1.0 14,471 + GFF10 0.37 -1.1 14,717 + GFF10 0.55 -0.9 14,718 - GFF10 0.55 +1.2 14,718 - GFF10 0.55 -0.0 14,718 - GFF10 0.55 -0.5 14,801 + GFF10 0.61 +0.4 14,802 - GFF10 0.61 -0.8
Or see this region's nucleotide sequence