Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF867 and GFF868 are separated by 536 nucleotides GFF868 and GFF869 are separated by 311 nucleotides
GFF867 - hypothetical protein, at 937,480 to 939,165
GFF867
GFF868 - hypothetical protein, at 939,702 to 940,682
GFF868
GFF869 - Lipid A export ATP-binding/permease protein MsbA, at 940,994 to 942,844
GFF869
Position (kb) 939
940
941 Strain fitness (log2 ratio) -2
-1
0
1 at 938.721 kb on - strand, within GFF867 at 938.721 kb on - strand, within GFF867 at 938.721 kb on - strand, within GFF867 at 938.721 kb on - strand, within GFF867 at 938.795 kb on + strand, within GFF867 at 938.795 kb on + strand, within GFF867 at 939.014 kb on + strand at 939.014 kb on + strand at 939.014 kb on + strand at 939.015 kb on - strand at 939.015 kb on - strand at 939.280 kb on + strand at 939.293 kb on - strand at 939.313 kb on - strand at 939.324 kb on - strand at 939.324 kb on - strand at 939.381 kb on + strand at 939.382 kb on - strand at 939.429 kb on + strand at 939.438 kb on + strand at 939.481 kb on + strand at 939.575 kb on + strand at 939.710 kb on + strand at 939.711 kb on - strand at 939.735 kb on + strand at 939.735 kb on + strand at 939.736 kb on - strand at 939.756 kb on - strand at 939.756 kb on - strand at 939.775 kb on + strand at 939.775 kb on + strand at 939.775 kb on + strand at 939.776 kb on - strand at 939.776 kb on - strand at 939.984 kb on + strand, within GFF868 at 939.984 kb on + strand, within GFF868 at 940.248 kb on + strand, within GFF868 at 940.248 kb on + strand, within GFF868 at 940.258 kb on + strand, within GFF868 at 940.278 kb on + strand, within GFF868 at 940.303 kb on - strand, within GFF868 at 940.335 kb on + strand, within GFF868 at 940.355 kb on + strand, within GFF868 at 940.386 kb on + strand, within GFF868 at 940.387 kb on - strand, within GFF868 at 940.410 kb on + strand, within GFF868 at 940.410 kb on + strand, within GFF868 at 940.484 kb on + strand, within GFF868 at 940.485 kb on - strand, within GFF868 at 940.485 kb on - strand, within GFF868 at 940.547 kb on + strand, within GFF868 at 940.566 kb on + strand, within GFF868 at 940.566 kb on + strand, within GFF868 at 940.569 kb on - strand, within GFF868 at 940.669 kb on - strand at 940.861 kb on + strand at 940.861 kb on + strand at 940.862 kb on - strand at 940.991 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 938,721 - GFF867 0.74 -0.4 938,721 - GFF867 0.74 -0.1 938,721 - GFF867 0.74 -0.6 938,721 - GFF867 0.74 -1.4 938,795 + GFF867 0.78 +0.7 938,795 + GFF867 0.78 +0.0 939,014 + +0.4 939,014 + -0.8 939,014 + -1.0 939,015 - +0.4 939,015 - -0.2 939,280 + -1.5 939,293 - -0.1 939,313 - -1.8 939,324 - -0.1 939,324 - -0.7 939,381 + -0.3 939,382 - -0.3 939,429 + -1.3 939,438 + -0.5 939,481 + -0.5 939,575 + +0.5 939,710 + -0.6 939,711 - -0.0 939,735 + -0.5 939,735 + +0.5 939,736 - +0.0 939,756 - +0.5 939,756 - -0.3 939,775 + +0.1 939,775 + +0.2 939,775 + -0.3 939,776 - +0.1 939,776 - +0.0 939,984 + GFF868 0.29 +0.3 939,984 + GFF868 0.29 -0.5 940,248 + GFF868 0.56 +0.4 940,248 + GFF868 0.56 +0.3 940,258 + GFF868 0.57 -1.8 940,278 + GFF868 0.59 +0.1 940,303 - GFF868 0.61 -1.3 940,335 + GFF868 0.65 -0.0 940,355 + GFF868 0.67 -2.7 940,386 + GFF868 0.70 +0.0 940,387 - GFF868 0.70 +0.3 940,410 + GFF868 0.72 +0.5 940,410 + GFF868 0.72 +0.7 940,484 + GFF868 0.80 -1.2 940,485 - GFF868 0.80 +0.8 940,485 - GFF868 0.80 -1.4 940,547 + GFF868 0.86 -1.6 940,566 + GFF868 0.88 -0.8 940,566 + GFF868 0.88 -0.6 940,569 - GFF868 0.88 -0.4 940,669 - -0.9 940,861 + -0.1 940,861 + -1.8 940,862 - -1.5 940,991 + +0.1
Or see this region's nucleotide sequence