Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF864 and GFF865 are separated by 280 nucleotides GFF865 and GFF866 are separated by 243 nucleotides GFF866 and GFF867 are separated by 53 nucleotides
GFF864 - Outer membrane efflux protein BepC, at 934,516 to 935,790
GFF864
GFF865 - Protein-L-isoaspartate O-methyltransferase, at 936,071 to 936,733
GFF865
GFF866 - hypothetical protein, at 936,977 to 937,426
GFF866
GFF867 - hypothetical protein, at 937,480 to 939,165
GFF867
Position (kb) 936
937 Strain fitness (log2 ratio) -2
-1
0
1
2 at 936.291 kb on + strand, within GFF865 at 936.292 kb on - strand, within GFF865 at 936.723 kb on + strand at 936.723 kb on + strand at 936.810 kb on + strand at 936.810 kb on + strand at 936.811 kb on - strand at 936.811 kb on - strand at 937.066 kb on + strand, within GFF866 at 937.066 kb on + strand, within GFF866 at 937.067 kb on - strand, within GFF866 at 937.073 kb on + strand, within GFF866 at 937.074 kb on - strand, within GFF866 at 937.074 kb on - strand, within GFF866 at 937.358 kb on + strand, within GFF866 at 937.358 kb on + strand, within GFF866 at 937.358 kb on + strand, within GFF866 at 937.358 kb on + strand, within GFF866 at 937.358 kb on + strand, within GFF866 at 937.359 kb on - strand, within GFF866 at 937.359 kb on - strand, within GFF866 at 937.612 kb on - strand at 937.670 kb on + strand, within GFF867 at 937.670 kb on + strand, within GFF867 at 937.670 kb on + strand, within GFF867 at 937.670 kb on + strand, within GFF867 at 937.671 kb on - strand, within GFF867 at 937.671 kb on - strand, within GFF867 at 937.700 kb on + strand, within GFF867 at 937.700 kb on + strand, within GFF867 at 937.700 kb on + strand, within GFF867 at 937.700 kb on + strand, within GFF867 at 937.700 kb on + strand, within GFF867 at 937.701 kb on - strand, within GFF867
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 936,291 + GFF865 0.33 +0.9 936,292 - GFF865 0.33 +0.0 936,723 + +1.9 936,723 + +0.3 936,810 + +1.2 936,810 + +0.0 936,811 - -0.3 936,811 - +0.8 937,066 + GFF866 0.20 -0.4 937,066 + GFF866 0.20 +1.7 937,067 - GFF866 0.20 -0.4 937,073 + GFF866 0.21 -0.4 937,074 - GFF866 0.22 -1.0 937,074 - GFF866 0.22 +0.2 937,358 + GFF866 0.85 +0.7 937,358 + GFF866 0.85 +0.9 937,358 + GFF866 0.85 +0.1 937,358 + GFF866 0.85 +0.8 937,358 + GFF866 0.85 +0.7 937,359 - GFF866 0.85 -0.5 937,359 - GFF866 0.85 -0.5 937,612 - -0.1 937,670 + GFF867 0.11 +2.0 937,670 + GFF867 0.11 +1.0 937,670 + GFF867 0.11 +0.2 937,670 + GFF867 0.11 -1.0 937,671 - GFF867 0.11 -0.2 937,671 - GFF867 0.11 -0.5 937,700 + GFF867 0.13 -0.6 937,700 + GFF867 0.13 +0.2 937,700 + GFF867 0.13 -1.1 937,700 + GFF867 0.13 -0.1 937,700 + GFF867 0.13 +0.8 937,701 - GFF867 0.13 -2.6
Or see this region's nucleotide sequence