Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF858 and GFF859 are separated by 151 nucleotides GFF859 and GFF860 are separated by 5 nucleotides GFF860 and GFF861 are separated by 3 nucleotides
GFF858 - Peptidoglycan O-acetyltransferase, at 926,384 to 927,790
GFF858
GFF859 - Exodeoxyribonuclease III, at 927,942 to 928,730
GFF859
GFF860 - hypothetical protein, at 928,736 to 929,152
GFF860
GFF861 - hypothetical protein, at 929,156 to 930,037
GFF861
Position (kb) 927
928
929 Strain fitness (log2 ratio) -1
0
1
2
3 at 927.327 kb on + strand, within GFF858 at 927.870 kb on + strand at 927.875 kb on - strand at 927.913 kb on + strand at 928.266 kb on + strand, within GFF859 at 928.266 kb on + strand, within GFF859 at 928.267 kb on - strand, within GFF859 at 928.267 kb on - strand, within GFF859 at 928.267 kb on - strand, within GFF859 at 928.267 kb on - strand, within GFF859 at 928.302 kb on + strand, within GFF859 at 928.303 kb on - strand, within GFF859 at 928.303 kb on - strand, within GFF859 at 928.817 kb on + strand, within GFF860 at 928.817 kb on + strand, within GFF860 at 928.817 kb on + strand, within GFF860 at 929.150 kb on + strand at 929.151 kb on - strand at 929.151 kb on - strand at 929.151 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 927,327 + GFF858 0.67 +0.0 927,870 + -0.4 927,875 - -0.6 927,913 + -0.5 928,266 + GFF859 0.41 -1.5 928,266 + GFF859 0.41 +0.2 928,267 - GFF859 0.41 -1.5 928,267 - GFF859 0.41 -1.3 928,267 - GFF859 0.41 +0.3 928,267 - GFF859 0.41 -0.6 928,302 + GFF859 0.46 +2.9 928,303 - GFF859 0.46 -0.8 928,303 - GFF859 0.46 +1.6 928,817 + GFF860 0.19 -0.5 928,817 + GFF860 0.19 +0.5 928,817 + GFF860 0.19 +0.3 929,150 + +1.1 929,151 - +1.1 929,151 - +1.0 929,151 - +0.2
Or see this region's nucleotide sequence