Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF830 and GFF831 overlap by 4 nucleotides GFF831 and GFF832 are separated by 174 nucleotides GFF832 and GFF833 overlap by 4 nucleotides
GFF830 - hypothetical protein, at 893,213 to 893,776
GFF830
GFF831 - hypothetical protein, at 893,773 to 894,279
GFF831
GFF832 - Phosphate acyltransferase, at 894,454 to 895,524
GFF832
GFF833 - 3-oxoacyl-[acyl-carrier-protein] synthase 3, at 895,521 to 896,495
GFF833
Position (kb) 894
895
896 Strain fitness (log2 ratio) -1
0
1
2 at 893.537 kb on + strand, within GFF830 at 893.561 kb on - strand, within GFF830 at 893.614 kb on + strand, within GFF830 at 893.615 kb on - strand, within GFF830 at 893.664 kb on - strand, within GFF830 at 893.789 kb on - strand at 893.789 kb on - strand at 893.789 kb on - strand at 894.067 kb on + strand, within GFF831 at 894.067 kb on + strand, within GFF831 at 894.068 kb on - strand, within GFF831 at 894.068 kb on - strand, within GFF831 at 894.068 kb on - strand, within GFF831 at 894.068 kb on - strand, within GFF831 at 894.068 kb on - strand, within GFF831 at 894.068 kb on - strand, within GFF831 at 894.070 kb on - strand, within GFF831 at 894.274 kb on + strand at 894.277 kb on + strand at 894.278 kb on - strand at 894.326 kb on + strand at 895.454 kb on + strand at 895.454 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 893,537 + GFF830 0.57 -0.2 893,561 - GFF830 0.62 +0.5 893,614 + GFF830 0.71 +0.5 893,615 - GFF830 0.71 +0.3 893,664 - GFF830 0.80 +0.8 893,789 - +1.0 893,789 - -1.0 893,789 - +2.3 894,067 + GFF831 0.58 -1.0 894,067 + GFF831 0.58 +0.4 894,068 - GFF831 0.58 +0.2 894,068 - GFF831 0.58 +0.3 894,068 - GFF831 0.58 +1.0 894,068 - GFF831 0.58 -0.1 894,068 - GFF831 0.58 -0.3 894,068 - GFF831 0.58 +0.9 894,070 - GFF831 0.59 +0.4 894,274 + -0.7 894,277 + +0.6 894,278 - +0.2 894,326 + -0.2 895,454 + -1.5 895,454 + +0.2
Or see this region's nucleotide sequence