Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF817 and GFF818 are separated by 481 nucleotides GFF818 and GFF819 are separated by 15 nucleotides GFF819 and GFF820 are separated by 152 nucleotides
GFF817 - Putative aliphatic sulfonates transport permease protein SsuC, at 873,969 to 874,859
GFF817
GFF818 - hypothetical protein, at 875,341 to 885,402
GFF818
GFF819 - hypothetical protein, at 885,418 to 885,867
GFF819
GFF820 - hypothetical protein, at 886,020 to 886,511
GFF820
Position (kb) 875
876
877
878
879
880
881
882
883
884
885
886 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 874.429 kb on - strand, within GFF817 at 874.985 kb on + strand at 874.985 kb on + strand at 874.986 kb on - strand at 874.986 kb on - strand at 875.103 kb on + strand at 875.184 kb on - strand at 875.184 kb on - strand at 875.184 kb on - strand at 875.213 kb on + strand at 875.214 kb on - strand at 875.452 kb on + strand at 875.452 kb on + strand at 875.452 kb on + strand at 875.452 kb on + strand at 875.452 kb on + strand at 875.452 kb on + strand at 875.453 kb on - strand at 875.812 kb on + strand at 875.813 kb on - strand at 875.813 kb on - strand at 875.813 kb on - strand at 875.815 kb on - strand at 876.242 kb on - strand at 876.351 kb on + strand, within GFF818 at 876.352 kb on - strand, within GFF818 at 876.352 kb on - strand, within GFF818 at 876.372 kb on - strand, within GFF818 at 876.372 kb on - strand, within GFF818 at 876.456 kb on + strand, within GFF818 at 876.457 kb on - strand, within GFF818 at 876.569 kb on - strand, within GFF818 at 877.000 kb on + strand, within GFF818 at 877.000 kb on + strand, within GFF818 at 877.001 kb on - strand, within GFF818 at 877.001 kb on - strand, within GFF818 at 877.001 kb on - strand, within GFF818 at 877.001 kb on - strand, within GFF818 at 877.006 kb on + strand, within GFF818 at 877.007 kb on - strand, within GFF818 at 877.194 kb on + strand, within GFF818 at 877.519 kb on + strand, within GFF818 at 877.519 kb on + strand, within GFF818 at 877.520 kb on - strand, within GFF818 at 877.684 kb on + strand, within GFF818 at 877.684 kb on + strand, within GFF818 at 877.685 kb on - strand, within GFF818 at 877.685 kb on - strand, within GFF818 at 877.685 kb on - strand, within GFF818 at 877.741 kb on + strand, within GFF818 at 877.742 kb on - strand, within GFF818 at 877.996 kb on + strand, within GFF818 at 877.996 kb on + strand, within GFF818 at 877.996 kb on + strand, within GFF818 at 877.997 kb on - strand, within GFF818 at 877.997 kb on - strand, within GFF818 at 878.641 kb on + strand, within GFF818 at 878.749 kb on - strand, within GFF818 at 878.982 kb on + strand, within GFF818 at 878.982 kb on + strand, within GFF818 at 879.258 kb on + strand, within GFF818 at 879.258 kb on + strand, within GFF818 at 879.346 kb on + strand, within GFF818 at 880.180 kb on + strand, within GFF818 at 880.180 kb on + strand, within GFF818 at 880.440 kb on + strand, within GFF818 at 880.586 kb on - strand, within GFF818 at 880.690 kb on - strand, within GFF818 at 880.984 kb on + strand, within GFF818 at 880.984 kb on + strand, within GFF818 at 880.985 kb on - strand, within GFF818 at 881.925 kb on + strand, within GFF818 at 881.925 kb on + strand, within GFF818 at 881.925 kb on + strand, within GFF818 at 881.926 kb on - strand, within GFF818 at 881.926 kb on - strand, within GFF818 at 882.296 kb on - strand, within GFF818 at 882.883 kb on + strand, within GFF818 at 882.884 kb on - strand, within GFF818 at 883.161 kb on + strand, within GFF818 at 883.161 kb on + strand, within GFF818 at 883.237 kb on + strand, within GFF818 at 883.237 kb on + strand, within GFF818 at 883.237 kb on + strand, within GFF818 at 883.237 kb on + strand, within GFF818 at 883.238 kb on - strand, within GFF818 at 883.290 kb on - strand, within GFF818 at 883.290 kb on - strand, within GFF818 at 883.409 kb on - strand, within GFF818 at 883.409 kb on - strand, within GFF818 at 883.409 kb on - strand, within GFF818 at 883.625 kb on + strand, within GFF818 at 883.770 kb on + strand, within GFF818 at 883.771 kb on - strand, within GFF818 at 884.170 kb on - strand, within GFF818 at 884.170 kb on - strand, within GFF818 at 884.179 kb on + strand, within GFF818 at 884.180 kb on - strand, within GFF818 at 884.243 kb on - strand, within GFF818 at 884.268 kb on + strand, within GFF818 at 884.268 kb on + strand, within GFF818 at 884.269 kb on - strand, within GFF818 at 884.602 kb on + strand at 884.602 kb on + strand at 884.603 kb on - strand at 884.603 kb on - strand at 884.603 kb on - strand at 884.644 kb on + strand at 884.645 kb on - strand at 884.725 kb on + strand at 884.920 kb on + strand at 884.920 kb on + strand at 884.920 kb on + strand at 884.921 kb on - strand at 884.950 kb on + strand at 884.951 kb on - strand at 884.951 kb on - strand at 884.971 kb on + strand at 884.974 kb on + strand at 884.974 kb on + strand at 884.974 kb on + strand at 884.974 kb on + strand at 884.975 kb on - strand at 884.975 kb on - strand at 884.975 kb on - strand at 885.154 kb on + strand at 885.154 kb on + strand at 885.154 kb on + strand at 885.154 kb on + strand at 885.155 kb on - strand at 885.155 kb on - strand at 885.155 kb on - strand at 885.334 kb on + strand at 885.334 kb on + strand at 885.335 kb on - strand at 885.335 kb on - strand at 885.342 kb on + strand at 885.343 kb on - strand at 885.343 kb on - strand at 885.441 kb on - strand at 885.535 kb on + strand, within GFF819 at 885.536 kb on - strand, within GFF819 at 886.016 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 874,429 - GFF817 0.52 -0.3 874,985 + -0.6 874,985 + +1.5 874,986 - +0.1 874,986 - -0.0 875,103 + -0.8 875,184 - -3.0 875,184 - -2.0 875,184 - -1.0 875,213 + +0.5 875,214 - -0.2 875,452 + -0.0 875,452 + -1.7 875,452 + +0.3 875,452 + -0.0 875,452 + +0.2 875,452 + +0.5 875,453 - +0.9 875,812 + +1.6 875,813 - +0.4 875,813 - +0.3 875,813 - -0.1 875,815 - +0.5 876,242 - +0.3 876,351 + GFF818 0.10 -1.1 876,352 - GFF818 0.10 -0.6 876,352 - GFF818 0.10 -0.4 876,372 - GFF818 0.10 +0.0 876,372 - GFF818 0.10 +0.3 876,456 + GFF818 0.11 +0.7 876,457 - GFF818 0.11 +0.3 876,569 - GFF818 0.12 -0.1 877,000 + GFF818 0.16 -0.9 877,000 + GFF818 0.16 +0.1 877,001 - GFF818 0.16 +0.2 877,001 - GFF818 0.16 -0.7 877,001 - GFF818 0.16 -0.2 877,001 - GFF818 0.16 -0.1 877,006 + GFF818 0.17 -0.9 877,007 - GFF818 0.17 +0.5 877,194 + GFF818 0.18 +0.5 877,519 + GFF818 0.22 -2.2 877,519 + GFF818 0.22 +0.4 877,520 - GFF818 0.22 +0.2 877,684 + GFF818 0.23 +0.6 877,684 + GFF818 0.23 -0.1 877,685 - GFF818 0.23 -0.4 877,685 - GFF818 0.23 -0.0 877,685 - GFF818 0.23 +0.5 877,741 + GFF818 0.24 -1.0 877,742 - GFF818 0.24 +0.1 877,996 + GFF818 0.26 -1.1 877,996 + GFF818 0.26 -0.4 877,996 + GFF818 0.26 -1.6 877,997 - GFF818 0.26 -0.6 877,997 - GFF818 0.26 -0.1 878,641 + GFF818 0.33 +0.2 878,749 - GFF818 0.34 +0.6 878,982 + GFF818 0.36 -0.6 878,982 + GFF818 0.36 -0.5 879,258 + GFF818 0.39 -0.7 879,258 + GFF818 0.39 +1.3 879,346 + GFF818 0.40 +0.9 880,180 + GFF818 0.48 +0.5 880,180 + GFF818 0.48 -0.8 880,440 + GFF818 0.51 +0.1 880,586 - GFF818 0.52 -0.0 880,690 - GFF818 0.53 +0.3 880,984 + GFF818 0.56 -0.8 880,984 + GFF818 0.56 +0.1 880,985 - GFF818 0.56 +0.5 881,925 + GFF818 0.65 +0.6 881,925 + GFF818 0.65 +0.6 881,925 + GFF818 0.65 +0.7 881,926 - GFF818 0.65 -0.8 881,926 - GFF818 0.65 -1.1 882,296 - GFF818 0.69 -1.7 882,883 + GFF818 0.75 +0.4 882,884 - GFF818 0.75 -0.5 883,161 + GFF818 0.78 -1.8 883,161 + GFF818 0.78 -0.5 883,237 + GFF818 0.78 +0.3 883,237 + GFF818 0.78 +0.4 883,237 + GFF818 0.78 +0.4 883,237 + GFF818 0.78 +0.2 883,238 - GFF818 0.78 +1.0 883,290 - GFF818 0.79 +2.1 883,290 - GFF818 0.79 +1.3 883,409 - GFF818 0.80 +0.5 883,409 - GFF818 0.80 -0.8 883,409 - GFF818 0.80 -2.1 883,625 + GFF818 0.82 +0.2 883,770 + GFF818 0.84 -1.1 883,771 - GFF818 0.84 +0.2 884,170 - GFF818 0.88 -2.1 884,170 - GFF818 0.88 -1.4 884,179 + GFF818 0.88 +0.4 884,180 - GFF818 0.88 -0.9 884,243 - GFF818 0.88 +0.5 884,268 + GFF818 0.89 -0.7 884,268 + GFF818 0.89 +0.6 884,269 - GFF818 0.89 +0.3 884,602 + +0.4 884,602 + +0.7 884,603 - +0.2 884,603 - +0.0 884,603 - +0.5 884,644 + -0.1 884,645 - +0.2 884,725 + -0.1 884,920 + -2.0 884,920 + -0.4 884,920 + +0.5 884,921 - -0.7 884,950 + -0.7 884,951 - +1.2 884,951 - -0.8 884,971 + -0.6 884,974 + +0.7 884,974 + -0.5 884,974 + -0.3 884,974 + +0.7 884,975 - +0.0 884,975 - -0.1 884,975 - -0.8 885,154 + -0.7 885,154 + +0.4 885,154 + +0.0 885,154 + +0.7 885,155 - +0.2 885,155 - +0.0 885,155 - -0.4 885,334 + -0.4 885,334 + -0.3 885,335 - +0.1 885,335 - -0.5 885,342 + +0.7 885,343 - -0.9 885,343 - -0.3 885,441 - +1.7 885,535 + GFF819 0.26 +1.3 885,536 - GFF819 0.26 -1.2 886,016 + +0.5
Or see this region's nucleotide sequence