Strain Fitness in Xanthobacter sp. DMC5 around GFF8

Experiment: Methanol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF6 and GFF7 are separated by 68 nucleotidesGFF7 and GFF8 are separated by 275 nucleotidesGFF8 and GFF9 are separated by 103 nucleotides GFF6 - 50S ribosomal protein L10, at 4,202 to 4,720 GFF6 GFF7 - 50S ribosomal protein L7/L12, at 4,789 to 5,163 GFF7 GFF8 - DNA-directed RNA polymerase subunit beta, at 5,439 to 9,515 GFF8 GFF9 - DNA-directed RNA polymerase subunit beta', at 9,619 to 13,803 GFF9 Position (kb) 5 6 7 8 9 10Strain fitness (log2 ratio) -1 0 1at 9.589 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Methanol (C)
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9,589 + -0.1

Or see this region's nucleotide sequence