Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF795 and GFF796 are separated by 115 nucleotides GFF796 and GFF797 are separated by 55 nucleotides
GFF795 - Thiosulfate sulfurtransferase GlpE, at 847,278 to 848,876
GFF795
GFF796 - 5-keto-D-gluconate 5-reductase, at 848,992 to 849,738
GFF796
GFF797 - Periplasmic dipeptide transport protein, at 849,794 to 851,404
GFF797
Position (kb) 848
849
850 Strain fitness (log2 ratio) -2
-1
0
1 at 848.028 kb on - strand, within GFF795 at 848.370 kb on - strand, within GFF795 at 848.490 kb on + strand, within GFF795 at 848.490 kb on + strand, within GFF795 at 848.491 kb on - strand, within GFF795 at 848.748 kb on + strand at 848.749 kb on - strand at 848.749 kb on - strand at 848.751 kb on - strand at 848.802 kb on + strand at 848.803 kb on - strand at 848.803 kb on - strand at 848.803 kb on - strand at 848.932 kb on + strand at 848.933 kb on - strand at 848.933 kb on - strand at 848.933 kb on - strand at 848.933 kb on - strand at 848.977 kb on + strand at 848.977 kb on + strand at 848.978 kb on - strand at 848.978 kb on - strand at 848.988 kb on + strand at 848.988 kb on + strand at 848.989 kb on - strand at 849.059 kb on + strand at 849.059 kb on + strand at 849.059 kb on + strand at 849.059 kb on + strand at 849.060 kb on - strand at 849.060 kb on - strand at 849.060 kb on - strand at 849.061 kb on + strand at 849.168 kb on + strand, within GFF796 at 849.175 kb on - strand, within GFF796 at 849.175 kb on - strand, within GFF796 at 849.175 kb on - strand, within GFF796 at 849.176 kb on + strand, within GFF796 at 849.177 kb on - strand, within GFF796 at 849.481 kb on + strand, within GFF796 at 849.481 kb on + strand, within GFF796 at 849.481 kb on + strand, within GFF796 at 849.482 kb on - strand, within GFF796 at 849.482 kb on - strand, within GFF796 at 849.849 kb on + strand at 849.850 kb on - strand at 849.850 kb on - strand at 849.850 kb on - strand at 850.045 kb on - strand, within GFF797 at 850.137 kb on + strand, within GFF797 at 850.137 kb on + strand, within GFF797 at 850.138 kb on - strand, within GFF797 at 850.138 kb on - strand, within GFF797 at 850.138 kb on - strand, within GFF797 at 850.140 kb on + strand, within GFF797 at 850.140 kb on + strand, within GFF797 at 850.165 kb on - strand, within GFF797 at 850.203 kb on + strand, within GFF797 at 850.203 kb on + strand, within GFF797 at 850.380 kb on + strand, within GFF797 at 850.380 kb on + strand, within GFF797 at 850.380 kb on + strand, within GFF797 at 850.381 kb on - strand, within GFF797 at 850.668 kb on + strand, within GFF797 at 850.668 kb on + strand, within GFF797 at 850.668 kb on + strand, within GFF797 at 850.669 kb on - strand, within GFF797
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 848,028 - GFF795 0.47 -0.2 848,370 - GFF795 0.68 -1.0 848,490 + GFF795 0.76 -0.4 848,490 + GFF795 0.76 +0.1 848,491 - GFF795 0.76 +1.6 848,748 + -1.0 848,749 - +1.1 848,749 - -0.5 848,751 - +0.7 848,802 + -0.5 848,803 - -0.6 848,803 - +0.6 848,803 - -0.1 848,932 + -2.5 848,933 - -0.0 848,933 - -0.4 848,933 - +0.7 848,933 - +0.1 848,977 + -0.4 848,977 + -0.7 848,978 - -0.2 848,978 - -0.2 848,988 + -1.8 848,988 + +0.3 848,989 - +0.1 849,059 + -0.6 849,059 + -0.1 849,059 + +1.1 849,059 + -0.0 849,060 - +0.6 849,060 - +0.1 849,060 - +1.0 849,061 + -0.6 849,168 + GFF796 0.24 -1.4 849,175 - GFF796 0.24 -0.7 849,175 - GFF796 0.24 -0.3 849,175 - GFF796 0.24 -0.1 849,176 + GFF796 0.25 -0.5 849,177 - GFF796 0.25 +0.1 849,481 + GFF796 0.65 -1.2 849,481 + GFF796 0.65 -0.8 849,481 + GFF796 0.65 -0.1 849,482 - GFF796 0.66 +1.1 849,482 - GFF796 0.66 -0.8 849,849 + -1.0 849,850 - -0.8 849,850 - +0.2 849,850 - +0.5 850,045 - GFF797 0.16 -0.5 850,137 + GFF797 0.21 -0.6 850,137 + GFF797 0.21 -0.5 850,138 - GFF797 0.21 -1.7 850,138 - GFF797 0.21 +1.3 850,138 - GFF797 0.21 +0.8 850,140 + GFF797 0.21 -0.5 850,140 + GFF797 0.21 -0.7 850,165 - GFF797 0.23 -0.2 850,203 + GFF797 0.25 -0.2 850,203 + GFF797 0.25 -0.8 850,380 + GFF797 0.36 +0.5 850,380 + GFF797 0.36 +0.8 850,380 + GFF797 0.36 +0.1 850,381 - GFF797 0.36 -0.9 850,668 + GFF797 0.54 +0.2 850,668 + GFF797 0.54 +0.5 850,668 + GFF797 0.54 +0.3 850,669 - GFF797 0.54 +0.2
Or see this region's nucleotide sequence