Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF794 and GFF795 are separated by 61 nucleotides GFF795 and GFF796 are separated by 115 nucleotides GFF796 and GFF797 are separated by 55 nucleotides
GFF794 - Decarboxylase NovR, at 846,389 to 847,216
GFF794
GFF795 - Thiosulfate sulfurtransferase GlpE, at 847,278 to 848,876
GFF795
GFF796 - 5-keto-D-gluconate 5-reductase, at 848,992 to 849,738
GFF796
GFF797 - Periplasmic dipeptide transport protein, at 849,794 to 851,404
GFF797
Position (kb) 847
848
849 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 846.339 kb on + strand at 846.527 kb on + strand, within GFF794 at 846.684 kb on - strand, within GFF794 at 846.836 kb on + strand, within GFF794 at 846.836 kb on + strand, within GFF794 at 846.836 kb on + strand, within GFF794 at 846.837 kb on - strand, within GFF794 at 846.849 kb on - strand, within GFF794 at 846.849 kb on - strand, within GFF794 at 846.849 kb on - strand, within GFF794 at 846.850 kb on + strand, within GFF794 at 846.850 kb on + strand, within GFF794 at 846.914 kb on + strand, within GFF794 at 846.916 kb on + strand, within GFF794 at 846.916 kb on + strand, within GFF794 at 846.916 kb on + strand, within GFF794 at 846.917 kb on - strand, within GFF794 at 846.974 kb on + strand, within GFF794 at 846.974 kb on + strand, within GFF794 at 846.974 kb on + strand, within GFF794 at 846.974 kb on + strand, within GFF794 at 846.975 kb on - strand, within GFF794 at 847.020 kb on - strand, within GFF794 at 847.205 kb on + strand at 847.437 kb on + strand at 847.558 kb on - strand, within GFF795 at 847.558 kb on - strand, within GFF795 at 847.611 kb on + strand, within GFF795 at 847.611 kb on + strand, within GFF795 at 847.611 kb on + strand, within GFF795 at 847.612 kb on - strand, within GFF795 at 847.620 kb on + strand, within GFF795 at 847.620 kb on + strand, within GFF795 at 847.621 kb on - strand, within GFF795 at 848.028 kb on - strand, within GFF795 at 848.370 kb on - strand, within GFF795 at 848.490 kb on + strand, within GFF795 at 848.490 kb on + strand, within GFF795 at 848.491 kb on - strand, within GFF795 at 848.748 kb on + strand at 848.749 kb on - strand at 848.749 kb on - strand at 848.751 kb on - strand at 848.802 kb on + strand at 848.803 kb on - strand at 848.803 kb on - strand at 848.803 kb on - strand at 848.932 kb on + strand at 848.933 kb on - strand at 848.933 kb on - strand at 848.933 kb on - strand at 848.933 kb on - strand at 848.977 kb on + strand at 848.977 kb on + strand at 848.978 kb on - strand at 848.978 kb on - strand at 848.988 kb on + strand at 848.988 kb on + strand at 848.989 kb on - strand at 849.059 kb on + strand at 849.059 kb on + strand at 849.059 kb on + strand at 849.059 kb on + strand at 849.060 kb on - strand at 849.060 kb on - strand at 849.060 kb on - strand at 849.061 kb on + strand at 849.168 kb on + strand, within GFF796 at 849.175 kb on - strand, within GFF796 at 849.175 kb on - strand, within GFF796 at 849.175 kb on - strand, within GFF796 at 849.176 kb on + strand, within GFF796 at 849.177 kb on - strand, within GFF796 at 849.481 kb on + strand, within GFF796 at 849.481 kb on + strand, within GFF796 at 849.481 kb on + strand, within GFF796 at 849.482 kb on - strand, within GFF796 at 849.482 kb on - strand, within GFF796 at 849.849 kb on + strand at 849.850 kb on - strand at 849.850 kb on - strand at 849.850 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 846,339 + +0.7 846,527 + GFF794 0.17 -1.2 846,684 - GFF794 0.36 +0.9 846,836 + GFF794 0.54 +0.4 846,836 + GFF794 0.54 -0.3 846,836 + GFF794 0.54 -2.0 846,837 - GFF794 0.54 +0.8 846,849 - GFF794 0.56 +0.5 846,849 - GFF794 0.56 -0.1 846,849 - GFF794 0.56 +0.1 846,850 + GFF794 0.56 -0.4 846,850 + GFF794 0.56 +0.4 846,914 + GFF794 0.63 -1.2 846,916 + GFF794 0.64 -1.3 846,916 + GFF794 0.64 -0.3 846,916 + GFF794 0.64 -0.6 846,917 - GFF794 0.64 -0.3 846,974 + GFF794 0.71 -2.1 846,974 + GFF794 0.71 -3.0 846,974 + GFF794 0.71 -0.3 846,974 + GFF794 0.71 -0.6 846,975 - GFF794 0.71 +0.1 847,020 - GFF794 0.76 +1.9 847,205 + +1.2 847,437 + -0.0 847,558 - GFF795 0.18 +0.2 847,558 - GFF795 0.18 -0.3 847,611 + GFF795 0.21 +0.1 847,611 + GFF795 0.21 -0.4 847,611 + GFF795 0.21 -0.7 847,612 - GFF795 0.21 +0.4 847,620 + GFF795 0.21 -0.5 847,620 + GFF795 0.21 +0.7 847,621 - GFF795 0.21 -0.8 848,028 - GFF795 0.47 -0.2 848,370 - GFF795 0.68 -1.0 848,490 + GFF795 0.76 -0.4 848,490 + GFF795 0.76 +0.1 848,491 - GFF795 0.76 +1.6 848,748 + -1.0 848,749 - +1.1 848,749 - -0.5 848,751 - +0.7 848,802 + -0.5 848,803 - -0.6 848,803 - +0.6 848,803 - -0.1 848,932 + -2.5 848,933 - -0.0 848,933 - -0.4 848,933 - +0.7 848,933 - +0.1 848,977 + -0.4 848,977 + -0.7 848,978 - -0.2 848,978 - -0.2 848,988 + -1.8 848,988 + +0.3 848,989 - +0.1 849,059 + -0.6 849,059 + -0.1 849,059 + +1.1 849,059 + -0.0 849,060 - +0.6 849,060 - +0.1 849,060 - +1.0 849,061 + -0.6 849,168 + GFF796 0.24 -1.4 849,175 - GFF796 0.24 -0.7 849,175 - GFF796 0.24 -0.3 849,175 - GFF796 0.24 -0.1 849,176 + GFF796 0.25 -0.5 849,177 - GFF796 0.25 +0.1 849,481 + GFF796 0.65 -1.2 849,481 + GFF796 0.65 -0.8 849,481 + GFF796 0.65 -0.1 849,482 - GFF796 0.66 +1.1 849,482 - GFF796 0.66 -0.8 849,849 + -1.0 849,850 - -0.8 849,850 - +0.2 849,850 - +0.5
Or see this region's nucleotide sequence