Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF793 and GFF794 are separated by 128 nucleotides GFF794 and GFF795 are separated by 61 nucleotides
GFF793 - Oligopeptide-binding protein AppA, at 844,653 to 846,260
GFF793
GFF794 - Decarboxylase NovR, at 846,389 to 847,216
GFF794
GFF795 - Thiosulfate sulfurtransferase GlpE, at 847,278 to 848,876
GFF795
Position (kb) 846
847
848 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 845.404 kb on + strand, within GFF793 at 845.404 kb on + strand, within GFF793 at 845.566 kb on + strand, within GFF793 at 845.585 kb on - strand, within GFF793 at 845.605 kb on + strand, within GFF793 at 845.605 kb on + strand, within GFF793 at 845.605 kb on + strand, within GFF793 at 845.605 kb on + strand, within GFF793 at 845.605 kb on + strand, within GFF793 at 845.606 kb on - strand, within GFF793 at 845.606 kb on - strand, within GFF793 at 845.812 kb on + strand, within GFF793 at 845.813 kb on - strand, within GFF793 at 845.813 kb on - strand, within GFF793 at 846.055 kb on + strand, within GFF793 at 846.055 kb on + strand, within GFF793 at 846.056 kb on - strand, within GFF793 at 846.056 kb on - strand, within GFF793 at 846.056 kb on - strand, within GFF793 at 846.339 kb on + strand at 846.527 kb on + strand, within GFF794 at 846.684 kb on - strand, within GFF794 at 846.836 kb on + strand, within GFF794 at 846.836 kb on + strand, within GFF794 at 846.836 kb on + strand, within GFF794 at 846.837 kb on - strand, within GFF794 at 846.849 kb on - strand, within GFF794 at 846.849 kb on - strand, within GFF794 at 846.849 kb on - strand, within GFF794 at 846.850 kb on + strand, within GFF794 at 846.850 kb on + strand, within GFF794 at 846.914 kb on + strand, within GFF794 at 846.916 kb on + strand, within GFF794 at 846.916 kb on + strand, within GFF794 at 846.916 kb on + strand, within GFF794 at 846.917 kb on - strand, within GFF794 at 846.974 kb on + strand, within GFF794 at 846.974 kb on + strand, within GFF794 at 846.974 kb on + strand, within GFF794 at 846.974 kb on + strand, within GFF794 at 846.975 kb on - strand, within GFF794 at 847.020 kb on - strand, within GFF794 at 847.205 kb on + strand at 847.437 kb on + strand at 847.558 kb on - strand, within GFF795 at 847.558 kb on - strand, within GFF795 at 847.611 kb on + strand, within GFF795 at 847.611 kb on + strand, within GFF795 at 847.611 kb on + strand, within GFF795 at 847.612 kb on - strand, within GFF795 at 847.620 kb on + strand, within GFF795 at 847.620 kb on + strand, within GFF795 at 847.621 kb on - strand, within GFF795 at 848.028 kb on - strand, within GFF795
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 845,404 + GFF793 0.47 +0.3 845,404 + GFF793 0.47 -0.4 845,566 + GFF793 0.57 -0.1 845,585 - GFF793 0.58 +0.9 845,605 + GFF793 0.59 -0.5 845,605 + GFF793 0.59 +0.3 845,605 + GFF793 0.59 -1.8 845,605 + GFF793 0.59 -0.2 845,605 + GFF793 0.59 -0.3 845,606 - GFF793 0.59 -1.3 845,606 - GFF793 0.59 -0.3 845,812 + GFF793 0.72 +0.0 845,813 - GFF793 0.72 -0.1 845,813 - GFF793 0.72 +1.5 846,055 + GFF793 0.87 -1.2 846,055 + GFF793 0.87 -1.9 846,056 - GFF793 0.87 -0.0 846,056 - GFF793 0.87 -0.2 846,056 - GFF793 0.87 -1.7 846,339 + +0.7 846,527 + GFF794 0.17 -1.2 846,684 - GFF794 0.36 +0.9 846,836 + GFF794 0.54 +0.4 846,836 + GFF794 0.54 -0.3 846,836 + GFF794 0.54 -2.0 846,837 - GFF794 0.54 +0.8 846,849 - GFF794 0.56 +0.5 846,849 - GFF794 0.56 -0.1 846,849 - GFF794 0.56 +0.1 846,850 + GFF794 0.56 -0.4 846,850 + GFF794 0.56 +0.4 846,914 + GFF794 0.63 -1.2 846,916 + GFF794 0.64 -1.3 846,916 + GFF794 0.64 -0.3 846,916 + GFF794 0.64 -0.6 846,917 - GFF794 0.64 -0.3 846,974 + GFF794 0.71 -2.1 846,974 + GFF794 0.71 -3.0 846,974 + GFF794 0.71 -0.3 846,974 + GFF794 0.71 -0.6 846,975 - GFF794 0.71 +0.1 847,020 - GFF794 0.76 +1.9 847,205 + +1.2 847,437 + -0.0 847,558 - GFF795 0.18 +0.2 847,558 - GFF795 0.18 -0.3 847,611 + GFF795 0.21 +0.1 847,611 + GFF795 0.21 -0.4 847,611 + GFF795 0.21 -0.7 847,612 - GFF795 0.21 +0.4 847,620 + GFF795 0.21 -0.5 847,620 + GFF795 0.21 +0.7 847,621 - GFF795 0.21 -0.8 848,028 - GFF795 0.47 -0.2
Or see this region's nucleotide sequence