Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF785 and GFF786 are separated by 254 nucleotides GFF786 and GFF787 overlap by 4 nucleotides
GFF785 - putative FMNH2-dependent monooxygenase SfnC, at 837,506 to 838,723
GFF785
GFF786 - Bicarbonate transport system permease protein CmpB, at 838,978 to 839,805
GFF786
GFF787 - hypothetical protein, at 839,802 to 841,004
GFF787
Position (kb) 838
839
840 Strain fitness (log2 ratio) -2
-1
0
1
2 at 837.996 kb on + strand, within GFF785 at 838.215 kb on + strand, within GFF785 at 838.215 kb on + strand, within GFF785 at 838.215 kb on + strand, within GFF785 at 838.215 kb on + strand, within GFF785 at 838.216 kb on - strand, within GFF785 at 838.216 kb on - strand, within GFF785 at 838.221 kb on + strand, within GFF785 at 838.221 kb on + strand, within GFF785 at 838.221 kb on + strand, within GFF785 at 838.221 kb on + strand, within GFF785 at 838.252 kb on - strand, within GFF785 at 838.300 kb on + strand, within GFF785 at 838.831 kb on + strand at 838.955 kb on + strand at 839.070 kb on - strand, within GFF786 at 839.102 kb on + strand, within GFF786 at 839.315 kb on - strand, within GFF786 at 839.348 kb on + strand, within GFF786 at 839.348 kb on + strand, within GFF786 at 839.348 kb on + strand, within GFF786 at 839.349 kb on - strand, within GFF786 at 839.349 kb on - strand, within GFF786 at 839.543 kb on + strand, within GFF786 at 839.543 kb on + strand, within GFF786 at 839.543 kb on + strand, within GFF786 at 839.544 kb on - strand, within GFF786 at 839.544 kb on - strand, within GFF786 at 839.544 kb on - strand, within GFF786 at 840.001 kb on + strand, within GFF787 at 840.002 kb on - strand, within GFF787 at 840.079 kb on + strand, within GFF787 at 840.080 kb on - strand, within GFF787 at 840.145 kb on + strand, within GFF787 at 840.388 kb on + strand, within GFF787 at 840.388 kb on + strand, within GFF787 at 840.547 kb on + strand, within GFF787 at 840.548 kb on - strand, within GFF787
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 837,996 + GFF785 0.40 +0.1 838,215 + GFF785 0.58 -0.6 838,215 + GFF785 0.58 -0.2 838,215 + GFF785 0.58 -0.1 838,215 + GFF785 0.58 +0.3 838,216 - GFF785 0.58 +2.3 838,216 - GFF785 0.58 -0.9 838,221 + GFF785 0.59 +0.2 838,221 + GFF785 0.59 -0.9 838,221 + GFF785 0.59 +0.9 838,221 + GFF785 0.59 +0.6 838,252 - GFF785 0.61 -0.6 838,300 + GFF785 0.65 +0.5 838,831 + -1.9 838,955 + +0.3 839,070 - GFF786 0.11 -0.5 839,102 + GFF786 0.15 +0.7 839,315 - GFF786 0.41 +0.2 839,348 + GFF786 0.45 +0.2 839,348 + GFF786 0.45 +0.3 839,348 + GFF786 0.45 -0.2 839,349 - GFF786 0.45 +0.5 839,349 - GFF786 0.45 -1.0 839,543 + GFF786 0.68 +0.9 839,543 + GFF786 0.68 -0.3 839,543 + GFF786 0.68 -1.2 839,544 - GFF786 0.68 -0.4 839,544 - GFF786 0.68 -0.1 839,544 - GFF786 0.68 +0.9 840,001 + GFF787 0.17 +0.6 840,002 - GFF787 0.17 -0.1 840,079 + GFF787 0.23 -0.9 840,080 - GFF787 0.23 -0.3 840,145 + GFF787 0.29 +0.8 840,388 + GFF787 0.49 +0.6 840,388 + GFF787 0.49 -0.6 840,547 + GFF787 0.62 -0.0 840,548 - GFF787 0.62 +1.7
Or see this region's nucleotide sequence