Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF780 and GFF781 overlap by 4 nucleotides GFF781 and GFF782 are separated by 230 nucleotides GFF782 and GFF783 are separated by 34 nucleotides GFF783 and GFF784 are separated by 3 nucleotides
GFF780 - hypothetical protein, at 832,556 to 834,181
GFF780
GFF781 - hypothetical protein, at 834,178 to 834,501
GFF781
GFF782 - hypothetical protein, at 834,732 to 835,796
GFF782
GFF783 - Aliphatic sulfonates import ATP-binding protein SsuB, at 835,831 to 836,613
GFF783
GFF784 - Putative aliphatic sulfonates transport permease protein SsuC, at 836,617 to 837,474
GFF784
Position (kb) 834
835
836 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 833.844 kb on - strand, within GFF780 at 833.990 kb on + strand, within GFF780 at 833.990 kb on + strand, within GFF780 at 833.991 kb on - strand, within GFF780 at 833.991 kb on - strand, within GFF780 at 834.326 kb on - strand, within GFF781 at 834.347 kb on - strand, within GFF781 at 834.347 kb on - strand, within GFF781 at 834.347 kb on - strand, within GFF781 at 834.418 kb on + strand, within GFF781 at 834.419 kb on - strand, within GFF781 at 834.499 kb on + strand at 834.499 kb on + strand at 834.500 kb on - strand at 834.500 kb on - strand at 834.775 kb on + strand at 834.776 kb on - strand at 834.818 kb on - strand at 835.228 kb on + strand, within GFF782 at 835.228 kb on + strand, within GFF782 at 835.228 kb on + strand, within GFF782 at 835.228 kb on + strand, within GFF782 at 835.229 kb on - strand, within GFF782 at 835.229 kb on - strand, within GFF782 at 835.229 kb on - strand, within GFF782 at 835.276 kb on + strand, within GFF782 at 835.276 kb on + strand, within GFF782 at 835.277 kb on - strand, within GFF782 at 835.319 kb on + strand, within GFF782 at 835.319 kb on + strand, within GFF782 at 835.319 kb on + strand, within GFF782 at 835.327 kb on + strand, within GFF782 at 835.327 kb on + strand, within GFF782 at 835.327 kb on + strand, within GFF782 at 835.328 kb on - strand, within GFF782 at 835.523 kb on + strand, within GFF782 at 835.524 kb on - strand, within GFF782 at 835.524 kb on - strand, within GFF782 at 835.595 kb on - strand, within GFF782 at 835.895 kb on + strand at 836.158 kb on + strand, within GFF783 at 836.158 kb on + strand, within GFF783 at 836.159 kb on - strand, within GFF783
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 833,844 - GFF780 0.79 -0.7 833,990 + GFF780 0.88 -1.2 833,990 + GFF780 0.88 -0.2 833,991 - GFF780 0.88 -0.8 833,991 - GFF780 0.88 -1.9 834,326 - GFF781 0.46 -0.4 834,347 - GFF781 0.52 +1.3 834,347 - GFF781 0.52 +0.6 834,347 - GFF781 0.52 -0.1 834,418 + GFF781 0.74 -0.6 834,419 - GFF781 0.74 +0.3 834,499 + -0.0 834,499 + +0.5 834,500 - +1.0 834,500 - -0.3 834,775 + -0.0 834,776 - -1.0 834,818 - +0.2 835,228 + GFF782 0.47 -0.1 835,228 + GFF782 0.47 -1.3 835,228 + GFF782 0.47 -0.9 835,228 + GFF782 0.47 +0.3 835,229 - GFF782 0.47 -0.7 835,229 - GFF782 0.47 +0.3 835,229 - GFF782 0.47 +2.3 835,276 + GFF782 0.51 -0.5 835,276 + GFF782 0.51 +0.6 835,277 - GFF782 0.51 -0.6 835,319 + GFF782 0.55 +1.3 835,319 + GFF782 0.55 -1.5 835,319 + GFF782 0.55 -2.9 835,327 + GFF782 0.56 +0.7 835,327 + GFF782 0.56 +0.7 835,327 + GFF782 0.56 +0.1 835,328 - GFF782 0.56 -0.9 835,523 + GFF782 0.74 +0.5 835,524 - GFF782 0.74 +0.2 835,524 - GFF782 0.74 -0.1 835,595 - GFF782 0.81 +1.0 835,895 + -0.8 836,158 + GFF783 0.42 +1.1 836,158 + GFF783 0.42 -1.2 836,159 - GFF783 0.42 -0.0
Or see this region's nucleotide sequence