Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF777 and GFF778 are separated by 243 nucleotides GFF778 and GFF779 are separated by 73 nucleotides
GFF777 - Putative aliphatic sulfonates transport permease protein SsuC, at 829,084 to 829,965
GFF777
GFF778 - hypothetical protein, at 830,209 to 831,321
GFF778
GFF779 - Alpha-ketoglutarate-dependent sulfate ester dioxygenase, at 831,395 to 832,363
GFF779
Position (kb) 830
831
832 Strain fitness (log2 ratio) -2
-1
0
1
2 at 829.238 kb on + strand, within GFF777 at 829.484 kb on + strand, within GFF777 at 829.575 kb on - strand, within GFF777 at 829.618 kb on + strand, within GFF777 at 829.730 kb on + strand, within GFF777 at 829.730 kb on + strand, within GFF777 at 829.730 kb on + strand, within GFF777 at 830.094 kb on + strand at 830.195 kb on + strand at 830.196 kb on - strand at 830.210 kb on + strand at 830.210 kb on + strand at 830.211 kb on - strand at 830.414 kb on + strand, within GFF778 at 830.414 kb on + strand, within GFF778 at 830.414 kb on + strand, within GFF778 at 830.414 kb on + strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.627 kb on + strand, within GFF778 at 830.627 kb on + strand, within GFF778 at 830.628 kb on - strand, within GFF778 at 830.628 kb on - strand, within GFF778 at 830.673 kb on - strand, within GFF778 at 830.673 kb on - strand, within GFF778 at 830.711 kb on + strand, within GFF778 at 830.712 kb on - strand, within GFF778 at 830.712 kb on - strand, within GFF778 at 831.152 kb on + strand, within GFF778 at 831.152 kb on + strand, within GFF778 at 831.153 kb on - strand, within GFF778 at 831.153 kb on - strand, within GFF778 at 831.153 kb on - strand, within GFF778 at 831.153 kb on - strand, within GFF778 at 831.516 kb on + strand, within GFF779 at 831.532 kb on - strand, within GFF779 at 831.633 kb on + strand, within GFF779 at 831.633 kb on + strand, within GFF779 at 831.634 kb on - strand, within GFF779 at 831.822 kb on + strand, within GFF779 at 831.822 kb on + strand, within GFF779 at 831.823 kb on - strand, within GFF779 at 831.828 kb on + strand, within GFF779 at 831.828 kb on + strand, within GFF779 at 831.828 kb on + strand, within GFF779 at 831.828 kb on + strand, within GFF779 at 831.895 kb on - strand, within GFF779 at 831.895 kb on - strand, within GFF779
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 829,238 + GFF777 0.17 -0.5 829,484 + GFF777 0.45 +0.3 829,575 - GFF777 0.56 -0.2 829,618 + GFF777 0.61 -0.2 829,730 + GFF777 0.73 -0.4 829,730 + GFF777 0.73 -0.6 829,730 + GFF777 0.73 +0.7 830,094 + +0.8 830,195 + -0.5 830,196 - -0.1 830,210 + -0.9 830,210 + +0.5 830,211 - -0.9 830,414 + GFF778 0.18 -0.1 830,414 + GFF778 0.18 -0.1 830,414 + GFF778 0.18 +0.4 830,414 + GFF778 0.18 -0.3 830,415 - GFF778 0.19 +0.9 830,415 - GFF778 0.19 +0.1 830,415 - GFF778 0.19 -0.2 830,415 - GFF778 0.19 +0.7 830,415 - GFF778 0.19 -0.2 830,415 - GFF778 0.19 -2.1 830,627 + GFF778 0.38 +0.1 830,627 + GFF778 0.38 +0.2 830,628 - GFF778 0.38 +0.1 830,628 - GFF778 0.38 -0.3 830,673 - GFF778 0.42 -0.0 830,673 - GFF778 0.42 +1.3 830,711 + GFF778 0.45 +0.1 830,712 - GFF778 0.45 +1.1 830,712 - GFF778 0.45 +0.3 831,152 + GFF778 0.85 -1.2 831,152 + GFF778 0.85 -0.1 831,153 - GFF778 0.85 +0.2 831,153 - GFF778 0.85 +0.9 831,153 - GFF778 0.85 -0.3 831,153 - GFF778 0.85 +0.4 831,516 + GFF779 0.12 +0.1 831,532 - GFF779 0.14 -0.3 831,633 + GFF779 0.25 -0.1 831,633 + GFF779 0.25 -1.8 831,634 - GFF779 0.25 -1.0 831,822 + GFF779 0.44 +0.4 831,822 + GFF779 0.44 +0.3 831,823 - GFF779 0.44 -0.1 831,828 + GFF779 0.45 -1.6 831,828 + GFF779 0.45 -0.4 831,828 + GFF779 0.45 -1.4 831,828 + GFF779 0.45 +2.2 831,895 - GFF779 0.52 +0.2 831,895 - GFF779 0.52 +0.5
Or see this region's nucleotide sequence