Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF773 and GFF774 overlap by 4 nucleotides GFF774 and GFF775 are separated by 3 nucleotides GFF775 and GFF776 overlap by 4 nucleotides
GFF773 - hypothetical protein, at 825,545 to 826,384
GFF773
GFF774 - hypothetical protein, at 826,381 to 827,454
GFF774
GFF775 - Aliphatic sulfonates import ATP-binding protein SsuB, at 827,458 to 828,273
GFF775
GFF776 - Putative aliphatic sulfonates transport permease protein SsuC, at 828,270 to 829,094
GFF776
Position (kb) 826
827
828 Strain fitness (log2 ratio) -1
0
1
2 at 825.570 kb on + strand at 825.571 kb on - strand at 825.571 kb on - strand at 825.631 kb on - strand, within GFF773 at 825.735 kb on + strand, within GFF773 at 825.736 kb on - strand, within GFF773 at 825.737 kb on + strand, within GFF773 at 825.737 kb on + strand, within GFF773 at 826.333 kb on + strand at 826.425 kb on - strand at 826.447 kb on + strand at 826.486 kb on + strand at 826.487 kb on - strand at 826.608 kb on - strand, within GFF774 at 826.608 kb on - strand, within GFF774 at 826.972 kb on - strand, within GFF774 at 827.225 kb on + strand, within GFF774 at 827.225 kb on + strand, within GFF774 at 827.232 kb on + strand, within GFF774 at 827.232 kb on + strand, within GFF774 at 827.233 kb on - strand, within GFF774 at 827.251 kb on + strand, within GFF774 at 827.251 kb on + strand, within GFF774 at 827.251 kb on + strand, within GFF774 at 827.251 kb on + strand, within GFF774 at 827.252 kb on - strand, within GFF774 at 827.252 kb on - strand, within GFF774 at 827.252 kb on - strand, within GFF774 at 827.253 kb on + strand, within GFF774 at 827.253 kb on + strand, within GFF774 at 827.253 kb on + strand, within GFF774 at 827.254 kb on - strand, within GFF774 at 827.254 kb on - strand, within GFF774 at 827.254 kb on - strand, within GFF774 at 827.254 kb on - strand, within GFF774 at 827.254 kb on - strand, within GFF774 at 827.359 kb on + strand at 828.048 kb on - strand, within GFF775 at 828.048 kb on - strand, within GFF775 at 828.048 kb on - strand, within GFF775 at 828.048 kb on - strand, within GFF775 at 828.189 kb on - strand, within GFF775
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 825,570 + -0.4 825,571 - -0.2 825,571 - -0.4 825,631 - GFF773 0.10 +1.9 825,735 + GFF773 0.23 +0.8 825,736 - GFF773 0.23 +0.5 825,737 + GFF773 0.23 +1.7 825,737 + GFF773 0.23 +0.2 826,333 + +0.3 826,425 - +0.6 826,447 + +1.0 826,486 + -0.7 826,487 - -0.1 826,608 - GFF774 0.21 +0.2 826,608 - GFF774 0.21 -1.6 826,972 - GFF774 0.55 -0.1 827,225 + GFF774 0.79 -1.4 827,225 + GFF774 0.79 -0.1 827,232 + GFF774 0.79 -0.0 827,232 + GFF774 0.79 -0.7 827,233 - GFF774 0.79 -0.3 827,251 + GFF774 0.81 +0.5 827,251 + GFF774 0.81 -0.4 827,251 + GFF774 0.81 +0.5 827,251 + GFF774 0.81 +0.3 827,252 - GFF774 0.81 +0.2 827,252 - GFF774 0.81 +0.7 827,252 - GFF774 0.81 -0.2 827,253 + GFF774 0.81 -1.0 827,253 + GFF774 0.81 +0.2 827,253 + GFF774 0.81 -0.0 827,254 - GFF774 0.81 -0.6 827,254 - GFF774 0.81 +0.5 827,254 - GFF774 0.81 +0.3 827,254 - GFF774 0.81 -1.2 827,254 - GFF774 0.81 -1.3 827,359 + -0.7 828,048 - GFF775 0.72 +0.5 828,048 - GFF775 0.72 +1.4 828,048 - GFF775 0.72 -0.4 828,048 - GFF775 0.72 -0.1 828,189 - GFF775 0.90 -1.1
Or see this region's nucleotide sequence