Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF761 and GFF762 overlap by 4 nucleotides GFF762 and GFF763 overlap by 4 nucleotides GFF763 and GFF764 are separated by 170 nucleotides
GFF761 - Lipopolysaccharide export system ATP-binding protein LptB, at 812,915 to 813,634
GFF761
GFF762 - Lipopolysaccharide export system ATP-binding protein LptB, at 813,631 to 814,407
GFF762
GFF763 - Leu/Ile/Val-binding protein, at 814,404 to 815,636
GFF763
GFF764 - Dimethyl-sulfide monooxygenase, at 815,807 to 817,180
GFF764
Position (kb) 814
815
816 Strain fitness (log2 ratio) -2
-1
0
1
2 at 813.838 kb on + strand, within GFF762 at 813.874 kb on + strand, within GFF762 at 813.875 kb on - strand, within GFF762 at 814.172 kb on - strand, within GFF762 at 814.194 kb on + strand, within GFF762 at 814.194 kb on + strand, within GFF762 at 814.195 kb on - strand, within GFF762 at 814.195 kb on - strand, within GFF762 at 814.519 kb on + strand at 814.520 kb on - strand at 814.747 kb on + strand, within GFF763 at 814.747 kb on + strand, within GFF763 at 814.747 kb on + strand, within GFF763 at 814.747 kb on + strand, within GFF763 at 814.747 kb on + strand, within GFF763 at 814.861 kb on + strand, within GFF763 at 814.862 kb on - strand, within GFF763 at 814.924 kb on + strand, within GFF763 at 814.985 kb on - strand, within GFF763 at 815.432 kb on + strand, within GFF763 at 815.909 kb on + strand at 815.910 kb on - strand at 815.924 kb on + strand at 815.925 kb on - strand at 815.925 kb on - strand at 816.000 kb on - strand, within GFF764 at 816.137 kb on + strand, within GFF764 at 816.184 kb on + strand, within GFF764 at 816.184 kb on + strand, within GFF764 at 816.184 kb on + strand, within GFF764 at 816.184 kb on + strand, within GFF764 at 816.184 kb on + strand, within GFF764 at 816.184 kb on + strand, within GFF764 at 816.285 kb on - strand, within GFF764 at 816.318 kb on - strand, within GFF764 at 816.425 kb on + strand, within GFF764 at 816.485 kb on + strand, within GFF764
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 813,838 + GFF762 0.27 -0.6 813,874 + GFF762 0.31 +0.4 813,875 - GFF762 0.31 +1.0 814,172 - GFF762 0.70 +1.1 814,194 + GFF762 0.72 -1.1 814,194 + GFF762 0.72 +0.2 814,195 - GFF762 0.73 -0.9 814,195 - GFF762 0.73 +0.0 814,519 + +0.5 814,520 - -0.2 814,747 + GFF763 0.28 -0.6 814,747 + GFF763 0.28 +0.7 814,747 + GFF763 0.28 -0.3 814,747 + GFF763 0.28 -0.9 814,747 + GFF763 0.28 -1.5 814,861 + GFF763 0.37 +0.4 814,862 - GFF763 0.37 -0.7 814,924 + GFF763 0.42 +0.9 814,985 - GFF763 0.47 -0.4 815,432 + GFF763 0.83 +2.0 815,909 + +0.5 815,910 - -2.0 815,924 + +0.3 815,925 - -0.5 815,925 - -0.2 816,000 - GFF764 0.14 +0.3 816,137 + GFF764 0.24 -0.7 816,184 + GFF764 0.27 +0.6 816,184 + GFF764 0.27 -0.0 816,184 + GFF764 0.27 +0.6 816,184 + GFF764 0.27 +0.1 816,184 + GFF764 0.27 +0.6 816,184 + GFF764 0.27 +0.4 816,285 - GFF764 0.35 -1.7 816,318 - GFF764 0.37 -0.4 816,425 + GFF764 0.45 -0.3 816,485 + GFF764 0.49 +0.2
Or see this region's nucleotide sequence