Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF720 and GFF721 overlap by 4 nucleotides GFF721 and GFF722 are separated by 31 nucleotides GFF722 and GFF723 are separated by 145 nucleotides GFF723 and GFF724 are separated by 112 nucleotides
GFF720 - 1-deoxy-D-xylulose-5-phosphate synthase, at 767,609 to 769,000
GFF720
GFF721 - hypothetical protein, at 768,997 to 769,704
GFF721
GFF722 - Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, at 769,736 to 771,103
GFF722
GFF723 - hypothetical protein, at 771,249 to 771,485
GFF723
GFF724 - hypothetical protein, at 771,598 to 772,233
GFF724
Position (kb) 769
770
771
772 Strain fitness (log2 ratio) -2
-1
0
1 at 768.992 kb on + strand at 769.039 kb on + strand at 769.039 kb on + strand at 769.039 kb on + strand at 769.040 kb on - strand at 769.243 kb on + strand, within GFF721 at 769.392 kb on + strand, within GFF721 at 769.429 kb on + strand, within GFF721 at 769.430 kb on - strand, within GFF721 at 769.587 kb on + strand, within GFF721 at 769.639 kb on + strand at 770.730 kb on - strand, within GFF722 at 770.838 kb on - strand, within GFF722 at 771.122 kb on - strand at 771.197 kb on + strand at 771.291 kb on + strand, within GFF723 at 771.354 kb on + strand, within GFF723 at 771.354 kb on + strand, within GFF723 at 771.355 kb on - strand, within GFF723 at 771.355 kb on - strand, within GFF723 at 771.466 kb on - strand at 771.466 kb on - strand at 771.466 kb on - strand at 771.898 kb on + strand, within GFF724 at 771.899 kb on - strand, within GFF724 at 772.062 kb on - strand, within GFF724
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 768,992 + -0.3 769,039 + +1.3 769,039 + -0.2 769,039 + -0.6 769,040 - +1.3 769,243 + GFF721 0.35 +1.3 769,392 + GFF721 0.56 -1.3 769,429 + GFF721 0.61 +0.5 769,430 - GFF721 0.61 -0.5 769,587 + GFF721 0.83 -0.2 769,639 + -0.0 770,730 - GFF722 0.73 -1.0 770,838 - GFF722 0.81 +0.3 771,122 - +1.0 771,197 + +1.4 771,291 + GFF723 0.18 +0.4 771,354 + GFF723 0.44 +0.0 771,354 + GFF723 0.44 -0.8 771,355 - GFF723 0.45 -1.0 771,355 - GFF723 0.45 +0.9 771,466 - +0.6 771,466 - -0.1 771,466 - +0.7 771,898 + GFF724 0.47 +0.2 771,899 - GFF724 0.47 -1.9 772,062 - GFF724 0.73 -1.3
Or see this region's nucleotide sequence