Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF710 and GFF711 are separated by 103 nucleotides GFF711 and GFF712 are separated by 245 nucleotides GFF712 and GFF713 are separated by 72 nucleotides
GFF710 - hypothetical protein, at 756,272 to 757,069
GFF710
GFF711 - hypothetical protein, at 757,173 to 757,364
GFF711
GFF712 - Putative transport protein YdiK, at 757,610 to 758,752
GFF712
GFF713 - hypothetical protein, at 758,825 to 760,312
GFF713
Position (kb) 757
758
759 Strain fitness (log2 ratio) -1
0
1 at 756.911 kb on + strand, within GFF710 at 756.911 kb on + strand, within GFF710 at 756.912 kb on - strand, within GFF710 at 756.912 kb on - strand, within GFF710 at 756.912 kb on - strand, within GFF710 at 756.998 kb on + strand at 757.175 kb on - strand at 757.175 kb on - strand at 757.175 kb on - strand at 757.401 kb on + strand at 757.402 kb on - strand at 757.545 kb on - strand at 757.563 kb on - strand at 757.779 kb on + strand, within GFF712 at 758.024 kb on + strand, within GFF712 at 758.024 kb on + strand, within GFF712 at 758.382 kb on + strand, within GFF712 at 758.773 kb on + strand at 758.774 kb on - strand at 758.774 kb on - strand at 758.777 kb on + strand at 758.800 kb on + strand at 758.802 kb on + strand at 758.806 kb on + strand at 759.000 kb on + strand, within GFF713 at 759.267 kb on - strand, within GFF713 at 759.334 kb on + strand, within GFF713 at 759.335 kb on - strand, within GFF713 at 759.389 kb on + strand, within GFF713 at 759.390 kb on - strand, within GFF713 at 759.617 kb on + strand, within GFF713 at 759.618 kb on - strand, within GFF713 at 759.717 kb on + strand, within GFF713
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 756,911 + GFF710 0.80 +1.5 756,911 + GFF710 0.80 +0.5 756,912 - GFF710 0.80 -0.1 756,912 - GFF710 0.80 -0.5 756,912 - GFF710 0.80 +0.1 756,998 + +0.6 757,175 - -0.3 757,175 - -0.6 757,175 - +0.4 757,401 + -0.1 757,402 - -0.0 757,545 - -0.7 757,563 - +0.8 757,779 + GFF712 0.15 -0.5 758,024 + GFF712 0.36 +0.5 758,024 + GFF712 0.36 -1.3 758,382 + GFF712 0.68 +1.1 758,773 + -1.6 758,774 - +0.7 758,774 - +0.4 758,777 + -0.1 758,800 + -0.6 758,802 + -0.6 758,806 + -0.2 759,000 + GFF713 0.12 -0.2 759,267 - GFF713 0.30 -0.0 759,334 + GFF713 0.34 +0.7 759,335 - GFF713 0.34 -0.9 759,389 + GFF713 0.38 +0.8 759,390 - GFF713 0.38 +1.1 759,617 + GFF713 0.53 -0.5 759,618 - GFF713 0.53 -0.5 759,717 + GFF713 0.60 -0.6
Or see this region's nucleotide sequence