Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF697 and GFF698 are separated by 53 nucleotides GFF698 and GFF699 are separated by 97 nucleotides GFF699 and GFF700 overlap by 14 nucleotides
GFF697 - O-acetyl-L-homoserine sulfhydrylase, at 746,044 to 747,348
GFF697
GFF698 - HTH-type transcriptional regulator CynR, at 747,402 to 748,301
GFF698
GFF699 - Holin-like protein CidA, at 748,399 to 748,839
GFF699
GFF700 - Inner membrane protein YohK, at 748,826 to 749,521
GFF700
Position (kb) 747
748
749 Strain fitness (log2 ratio) -2
-1
0
1
2 at 746.713 kb on + strand, within GFF697 at 746.959 kb on - strand, within GFF697 at 747.023 kb on - strand, within GFF697 at 747.023 kb on - strand, within GFF697 at 747.431 kb on - strand at 747.478 kb on + strand at 747.478 kb on + strand at 747.478 kb on + strand at 747.479 kb on - strand at 747.479 kb on - strand at 747.479 kb on - strand at 747.569 kb on - strand, within GFF698 at 747.569 kb on - strand, within GFF698 at 748.362 kb on + strand at 748.437 kb on + strand at 748.716 kb on + strand, within GFF699 at 748.716 kb on + strand, within GFF699 at 748.717 kb on - strand, within GFF699 at 748.837 kb on + strand at 748.837 kb on + strand at 748.886 kb on + strand at 748.886 kb on + strand at 748.886 kb on + strand at 749.072 kb on + strand, within GFF700 at 749.072 kb on + strand, within GFF700 at 749.072 kb on + strand, within GFF700 at 749.073 kb on - strand, within GFF700 at 749.073 kb on - strand, within GFF700 at 749.099 kb on + strand, within GFF700
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 746,713 + GFF697 0.51 -0.0 746,959 - GFF697 0.70 +1.9 747,023 - GFF697 0.75 -1.8 747,023 - GFF697 0.75 +0.7 747,431 - +0.8 747,478 + +0.7 747,478 + -0.6 747,478 + +0.5 747,479 - +0.4 747,479 - +0.1 747,479 - +0.8 747,569 - GFF698 0.19 -0.7 747,569 - GFF698 0.19 +0.1 748,362 + -0.4 748,437 + -0.5 748,716 + GFF699 0.72 +0.2 748,716 + GFF699 0.72 -0.0 748,717 - GFF699 0.72 +0.4 748,837 + +0.1 748,837 + -0.7 748,886 + +0.3 748,886 + +0.1 748,886 + -0.5 749,072 + GFF700 0.35 +0.2 749,072 + GFF700 0.35 -0.2 749,072 + GFF700 0.35 -0.9 749,073 - GFF700 0.35 -0.2 749,073 - GFF700 0.35 +0.9 749,099 + GFF700 0.39 -1.4
Or see this region's nucleotide sequence