Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF694 and GFF695 are separated by 166 nucleotides GFF695 and GFF696 are separated by 17 nucleotides GFF696 and GFF697 are separated by 71 nucleotides
GFF694 - Biotin transporter BioY2, at 743,891 to 744,472
GFF694
GFF695 - D-aminoacyl-tRNA deacylase, at 744,639 to 745,415
GFF695
GFF696 - hypothetical protein, at 745,433 to 745,972
GFF696
GFF697 - O-acetyl-L-homoserine sulfhydrylase, at 746,044 to 747,348
GFF697
Position (kb) 745
746 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 744.524 kb on + strand at 744.607 kb on + strand at 744.607 kb on + strand at 744.927 kb on + strand, within GFF695 at 744.927 kb on + strand, within GFF695 at 744.928 kb on - strand, within GFF695 at 744.928 kb on - strand, within GFF695 at 744.934 kb on - strand, within GFF695 at 744.934 kb on - strand, within GFF695 at 745.152 kb on + strand, within GFF695 at 745.152 kb on + strand, within GFF695 at 745.386 kb on + strand at 745.387 kb on - strand at 745.387 kb on - strand at 745.460 kb on + strand at 745.463 kb on - strand at 745.535 kb on + strand, within GFF696 at 745.535 kb on + strand, within GFF696 at 745.536 kb on - strand, within GFF696 at 745.551 kb on - strand, within GFF696 at 745.578 kb on - strand, within GFF696 at 745.841 kb on + strand, within GFF696 at 745.841 kb on + strand, within GFF696 at 745.842 kb on - strand, within GFF696 at 745.984 kb on - strand at 745.991 kb on + strand at 746.013 kb on + strand at 746.013 kb on + strand at 746.013 kb on + strand at 746.014 kb on - strand at 746.155 kb on + strand at 746.155 kb on + strand at 746.156 kb on - strand at 746.233 kb on + strand, within GFF697 at 746.233 kb on + strand, within GFF697 at 746.233 kb on + strand, within GFF697 at 746.234 kb on - strand, within GFF697 at 746.234 kb on - strand, within GFF697 at 746.234 kb on - strand, within GFF697 at 746.235 kb on + strand, within GFF697 at 746.235 kb on + strand, within GFF697 at 746.398 kb on + strand, within GFF697 at 746.399 kb on - strand, within GFF697 at 746.713 kb on + strand, within GFF697 at 746.959 kb on - strand, within GFF697
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 744,524 + -1.7 744,607 + -1.0 744,607 + -1.8 744,927 + GFF695 0.37 -2.3 744,927 + GFF695 0.37 +0.5 744,928 - GFF695 0.37 +0.5 744,928 - GFF695 0.37 -0.2 744,934 - GFF695 0.38 -0.3 744,934 - GFF695 0.38 +1.1 745,152 + GFF695 0.66 -2.2 745,152 + GFF695 0.66 -0.7 745,386 + -0.6 745,387 - +1.1 745,387 - -0.5 745,460 + -1.6 745,463 - -0.8 745,535 + GFF696 0.19 -1.5 745,535 + GFF696 0.19 -1.7 745,536 - GFF696 0.19 +0.1 745,551 - GFF696 0.22 +1.0 745,578 - GFF696 0.27 +2.5 745,841 + GFF696 0.76 -1.6 745,841 + GFF696 0.76 -1.1 745,842 - GFF696 0.76 -0.7 745,984 - -0.8 745,991 + -1.4 746,013 + -2.8 746,013 + -1.0 746,013 + -2.3 746,014 - +1.0 746,155 + +0.2 746,155 + +0.7 746,156 - +1.7 746,233 + GFF697 0.14 -0.1 746,233 + GFF697 0.14 +0.9 746,233 + GFF697 0.14 +1.2 746,234 - GFF697 0.15 -0.1 746,234 - GFF697 0.15 +0.6 746,234 - GFF697 0.15 +1.4 746,235 + GFF697 0.15 -0.9 746,235 + GFF697 0.15 +0.5 746,398 + GFF697 0.27 +0.8 746,399 - GFF697 0.27 -2.3 746,713 + GFF697 0.51 -0.0 746,959 - GFF697 0.70 +1.9
Or see this region's nucleotide sequence