Strain Fitness in Xanthobacter sp. DMC5 around GFF69

Experiment: Methanol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF68 and GFF69 are separated by 151 nucleotidesGFF69 and GFF70 are separated by 65 nucleotides GFF68 - Inositol-1-monophosphatase, at 78,300 to 79,088 GFF68 GFF69 - Tol-Pal system protein TolB, at 79,240 to 80,646 GFF69 GFF70 - hypothetical protein, at 80,712 to 81,656 GFF70 Position (kb) 79 80 81Strain fitness (log2 ratio) -1 0 1at 79.177 kb on - strandat 79.235 kb on + strandat 80.714 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Methanol (C)
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79,177 - -1.3
79,235 + +0.7
80,714 - +0.7

Or see this region's nucleotide sequence