Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF686 and GFF687 are separated by 135 nucleotides GFF687 and GFF688 are separated by 694 nucleotides
GFF686 - hypothetical protein, at 735,147 to 736,241
GFF686
GFF687 - hypothetical protein, at 736,377 to 737,036
GFF687
GFF688 - Endolytic peptidoglycan transglycosylase RlpA, at 737,731 to 738,591
GFF688
Position (kb) 736
737
738 Strain fitness (log2 ratio) -2
-1
0
1
2 at 735.387 kb on + strand, within GFF686 at 735.388 kb on - strand, within GFF686 at 735.388 kb on - strand, within GFF686 at 735.471 kb on + strand, within GFF686 at 735.472 kb on - strand, within GFF686 at 735.472 kb on - strand, within GFF686 at 735.472 kb on - strand, within GFF686 at 735.696 kb on + strand, within GFF686 at 735.870 kb on + strand, within GFF686 at 735.871 kb on - strand, within GFF686 at 736.466 kb on + strand, within GFF687 at 736.543 kb on + strand, within GFF687 at 736.625 kb on - strand, within GFF687 at 736.766 kb on - strand, within GFF687 at 736.852 kb on + strand, within GFF687 at 736.852 kb on + strand, within GFF687 at 736.971 kb on - strand at 736.989 kb on + strand at 736.989 kb on + strand at 736.990 kb on - strand at 736.990 kb on - strand at 736.990 kb on - strand at 736.990 kb on - strand at 737.028 kb on + strand at 737.028 kb on + strand at 737.029 kb on - strand at 737.029 kb on - strand at 737.095 kb on + strand at 737.149 kb on + strand at 737.179 kb on + strand at 737.188 kb on - strand at 737.188 kb on - strand at 737.233 kb on + strand at 737.233 kb on + strand at 737.233 kb on + strand at 737.420 kb on - strand at 737.420 kb on - strand at 737.531 kb on + strand at 737.741 kb on + strand at 737.930 kb on - strand, within GFF688 at 737.948 kb on - strand, within GFF688 at 737.968 kb on + strand, within GFF688 at 737.968 kb on + strand, within GFF688 at 737.968 kb on + strand, within GFF688 at 737.968 kb on + strand, within GFF688 at 737.969 kb on - strand, within GFF688 at 737.969 kb on - strand, within GFF688 at 737.969 kb on - strand, within GFF688 at 737.992 kb on + strand, within GFF688
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 735,387 + GFF686 0.22 +0.2 735,388 - GFF686 0.22 -0.8 735,388 - GFF686 0.22 -0.6 735,471 + GFF686 0.30 -0.8 735,472 - GFF686 0.30 +0.5 735,472 - GFF686 0.30 -0.9 735,472 - GFF686 0.30 +1.6 735,696 + GFF686 0.50 -0.0 735,870 + GFF686 0.66 -0.2 735,871 - GFF686 0.66 +1.4 736,466 + GFF687 0.13 +0.5 736,543 + GFF687 0.25 +0.2 736,625 - GFF687 0.38 -0.2 736,766 - GFF687 0.59 +0.9 736,852 + GFF687 0.72 +0.8 736,852 + GFF687 0.72 +0.1 736,971 - +1.0 736,989 + -0.2 736,989 + -2.2 736,990 - +0.3 736,990 - -0.5 736,990 - -1.0 736,990 - -0.8 737,028 + -0.4 737,028 + +0.1 737,029 - +0.7 737,029 - +0.8 737,095 + -1.0 737,149 + +0.3 737,179 + +1.1 737,188 - +1.3 737,188 - -0.1 737,233 + -1.8 737,233 + +0.9 737,233 + -0.5 737,420 - -2.1 737,420 - -0.0 737,531 + +1.3 737,741 + +0.6 737,930 - GFF688 0.23 +1.6 737,948 - GFF688 0.25 -0.9 737,968 + GFF688 0.28 +0.7 737,968 + GFF688 0.28 -0.4 737,968 + GFF688 0.28 +1.8 737,968 + GFF688 0.28 +0.1 737,969 - GFF688 0.28 +1.9 737,969 - GFF688 0.28 +1.3 737,969 - GFF688 0.28 +2.0 737,992 + GFF688 0.30 -0.5
Or see this region's nucleotide sequence