Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF671 and GFF672 are separated by 115 nucleotides GFF672 and GFF673 are separated by 152 nucleotides GFF673 and GFF674 overlap by 4 nucleotides GFF674 and GFF675 are separated by 13 nucleotides
GFF671 - hypothetical protein, at 722,372 to 722,866
GFF671
GFF672 - Transcription elongation factor GreB, at 722,982 to 723,458
GFF672
GFF673 - Maltose regulon regulatory protein MalI, at 723,611 to 724,735
GFF673
GFF674 - Glutamine transport system permease protein GlnP, at 724,732 to 725,406
GFF674
GFF675 - L-cystine transport system permease protein YecS, at 725,420 to 726,073
GFF675
Position (kb) 723
724
725 Strain fitness (log2 ratio) -2
-1
0
1 at 722.922 kb on - strand at 723.198 kb on + strand, within GFF672 at 723.363 kb on + strand, within GFF672 at 723.363 kb on + strand, within GFF672 at 723.363 kb on + strand, within GFF672 at 723.364 kb on - strand, within GFF672 at 723.364 kb on - strand, within GFF672 at 723.460 kb on - strand at 723.520 kb on + strand at 723.852 kb on - strand, within GFF673 at 723.852 kb on - strand, within GFF673 at 723.980 kb on + strand, within GFF673 at 723.980 kb on + strand, within GFF673 at 723.980 kb on + strand, within GFF673 at 723.980 kb on + strand, within GFF673 at 723.981 kb on - strand, within GFF673 at 724.178 kb on + strand, within GFF673 at 724.179 kb on - strand, within GFF673 at 724.179 kb on - strand, within GFF673 at 724.386 kb on - strand, within GFF673 at 724.442 kb on + strand, within GFF673 at 724.443 kb on - strand, within GFF673 at 724.443 kb on - strand, within GFF673 at 724.663 kb on - strand at 724.738 kb on + strand at 724.739 kb on - strand at 724.739 kb on - strand at 724.739 kb on - strand at 724.739 kb on - strand at 724.782 kb on - strand at 724.782 kb on - strand at 724.782 kb on - strand at 724.909 kb on + strand, within GFF674 at 724.909 kb on + strand, within GFF674 at 724.910 kb on - strand, within GFF674 at 724.910 kb on - strand, within GFF674 at 724.910 kb on - strand, within GFF674 at 724.910 kb on - strand, within GFF674 at 724.910 kb on - strand, within GFF674 at 725.042 kb on - strand, within GFF674 at 725.140 kb on + strand, within GFF674 at 725.140 kb on + strand, within GFF674 at 725.140 kb on + strand, within GFF674 at 725.140 kb on + strand, within GFF674 at 725.141 kb on - strand, within GFF674 at 725.141 kb on - strand, within GFF674 at 725.141 kb on - strand, within GFF674 at 725.141 kb on - strand, within GFF674 at 725.302 kb on + strand, within GFF674 at 725.302 kb on + strand, within GFF674 at 725.302 kb on + strand, within GFF674 at 725.302 kb on + strand, within GFF674 at 725.305 kb on - strand, within GFF674 at 725.324 kb on - strand, within GFF674 at 725.368 kb on + strand at 725.369 kb on - strand at 725.369 kb on - strand at 725.585 kb on + strand, within GFF675 at 725.585 kb on + strand, within GFF675 at 725.586 kb on - strand, within GFF675 at 725.586 kb on - strand, within GFF675 at 725.586 kb on - strand, within GFF675 at 725.586 kb on - strand, within GFF675
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 722,922 - -0.8 723,198 + GFF672 0.45 +0.2 723,363 + GFF672 0.80 -0.3 723,363 + GFF672 0.80 -0.9 723,363 + GFF672 0.80 +0.5 723,364 - GFF672 0.80 +0.1 723,364 - GFF672 0.80 +0.2 723,460 - +0.6 723,520 + -0.0 723,852 - GFF673 0.21 -1.0 723,852 - GFF673 0.21 +0.3 723,980 + GFF673 0.33 -1.7 723,980 + GFF673 0.33 +1.0 723,980 + GFF673 0.33 -0.9 723,980 + GFF673 0.33 -0.5 723,981 - GFF673 0.33 +0.0 724,178 + GFF673 0.50 +0.2 724,179 - GFF673 0.50 +0.5 724,179 - GFF673 0.50 +1.1 724,386 - GFF673 0.69 -0.0 724,442 + GFF673 0.74 -0.4 724,443 - GFF673 0.74 -1.0 724,443 - GFF673 0.74 -0.5 724,663 - +0.1 724,738 + -1.2 724,739 - +0.1 724,739 - +0.3 724,739 - -0.9 724,739 - +0.7 724,782 - -0.2 724,782 - +1.0 724,782 - -0.3 724,909 + GFF674 0.26 +0.4 724,909 + GFF674 0.26 +0.6 724,910 - GFF674 0.26 +0.6 724,910 - GFF674 0.26 -0.5 724,910 - GFF674 0.26 +1.0 724,910 - GFF674 0.26 +0.7 724,910 - GFF674 0.26 -0.9 725,042 - GFF674 0.46 -0.3 725,140 + GFF674 0.60 -1.6 725,140 + GFF674 0.60 -0.2 725,140 + GFF674 0.60 -0.0 725,140 + GFF674 0.60 +0.3 725,141 - GFF674 0.61 -0.3 725,141 - GFF674 0.61 -2.7 725,141 - GFF674 0.61 -0.7 725,141 - GFF674 0.61 -0.3 725,302 + GFF674 0.84 -0.7 725,302 + GFF674 0.84 +0.2 725,302 + GFF674 0.84 +0.6 725,302 + GFF674 0.84 -1.7 725,305 - GFF674 0.85 -0.3 725,324 - GFF674 0.88 -1.0 725,368 + -0.4 725,369 - -1.9 725,369 - -2.6 725,585 + GFF675 0.25 +0.3 725,585 + GFF675 0.25 +0.3 725,586 - GFF675 0.25 -0.0 725,586 - GFF675 0.25 +0.5 725,586 - GFF675 0.25 -1.0 725,586 - GFF675 0.25 -0.8
Or see this region's nucleotide sequence