Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF652 and GFF653 are separated by 104 nucleotides GFF653 and GFF654 are separated by 18 nucleotides GFF654 and GFF655 are separated by 293 nucleotides
GFF652 - Enamidase, at 700,205 to 701,404
GFF652
GFF653 - Ferredoxin--NADP reductase, at 701,509 to 702,282
GFF653
GFF654 - Ferredoxin-2, at 702,301 to 702,633
GFF654
GFF655 - Nicotinate dehydrogenase subunit B, at 702,927 to 706,475
GFF655
Position (kb) 702
703 Strain fitness (log2 ratio) -1
0
1 at 701.452 kb on - strand at 701.457 kb on + strand at 701.671 kb on + strand, within GFF653 at 701.672 kb on - strand, within GFF653 at 701.754 kb on - strand, within GFF653 at 701.756 kb on + strand, within GFF653 at 701.828 kb on + strand, within GFF653 at 701.828 kb on + strand, within GFF653 at 701.828 kb on + strand, within GFF653 at 701.829 kb on - strand, within GFF653 at 701.888 kb on + strand, within GFF653 at 701.889 kb on - strand, within GFF653 at 701.889 kb on - strand, within GFF653 at 701.889 kb on - strand, within GFF653 at 701.889 kb on - strand, within GFF653 at 701.889 kb on - strand, within GFF653 at 701.951 kb on + strand, within GFF653 at 701.951 kb on + strand, within GFF653 at 701.968 kb on + strand, within GFF653 at 702.126 kb on - strand, within GFF653 at 702.303 kb on - strand at 702.417 kb on - strand, within GFF654 at 702.555 kb on - strand, within GFF654 at 702.593 kb on + strand, within GFF654 at 702.594 kb on - strand, within GFF654 at 702.626 kb on + strand at 702.626 kb on + strand at 702.627 kb on - strand at 702.627 kb on - strand at 702.989 kb on + strand at 703.348 kb on + strand, within GFF655 at 703.348 kb on + strand, within GFF655 at 703.349 kb on - strand, within GFF655
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 701,452 - +0.4 701,457 + +1.3 701,671 + GFF653 0.21 +0.0 701,672 - GFF653 0.21 +0.2 701,754 - GFF653 0.32 -1.3 701,756 + GFF653 0.32 -0.4 701,828 + GFF653 0.41 -0.2 701,828 + GFF653 0.41 -0.5 701,828 + GFF653 0.41 +0.7 701,829 - GFF653 0.41 -0.7 701,888 + GFF653 0.49 +0.5 701,889 - GFF653 0.49 +0.1 701,889 - GFF653 0.49 -0.5 701,889 - GFF653 0.49 +0.7 701,889 - GFF653 0.49 -0.7 701,889 - GFF653 0.49 +0.8 701,951 + GFF653 0.57 +0.4 701,951 + GFF653 0.57 +0.3 701,968 + GFF653 0.59 -0.5 702,126 - GFF653 0.80 -1.7 702,303 - +0.1 702,417 - GFF654 0.35 +0.4 702,555 - GFF654 0.76 +1.3 702,593 + GFF654 0.88 +0.4 702,594 - GFF654 0.88 +0.6 702,626 + -1.0 702,626 + -0.7 702,627 - -1.4 702,627 - +0.1 702,989 + -0.3 703,348 + GFF655 0.12 +1.0 703,348 + GFF655 0.12 -0.0 703,349 - GFF655 0.12 +1.1
Or see this region's nucleotide sequence