Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF651 and GFF652 are separated by 5 nucleotides GFF652 and GFF653 are separated by 104 nucleotides GFF653 and GFF654 are separated by 18 nucleotides
GFF651 - hypothetical protein, at 699,273 to 700,199
GFF651
GFF652 - Enamidase, at 700,205 to 701,404
GFF652
GFF653 - Ferredoxin--NADP reductase, at 701,509 to 702,282
GFF653
GFF654 - Ferredoxin-2, at 702,301 to 702,633
GFF654
Position (kb) 700
701
702 Strain fitness (log2 ratio) -2
-1
0
1 at 699.244 kb on - strand at 699.330 kb on + strand at 699.555 kb on + strand, within GFF651 at 699.555 kb on + strand, within GFF651 at 699.558 kb on + strand, within GFF651 at 699.841 kb on - strand, within GFF651 at 699.876 kb on + strand, within GFF651 at 699.949 kb on - strand, within GFF651 at 699.949 kb on - strand, within GFF651 at 699.949 kb on - strand, within GFF651 at 700.005 kb on + strand, within GFF651 at 700.006 kb on - strand, within GFF651 at 700.006 kb on - strand, within GFF651 at 700.363 kb on - strand, within GFF652 at 700.664 kb on + strand, within GFF652 at 700.665 kb on - strand, within GFF652 at 700.815 kb on + strand, within GFF652 at 700.815 kb on + strand, within GFF652 at 700.815 kb on + strand, within GFF652 at 700.816 kb on - strand, within GFF652 at 701.272 kb on + strand, within GFF652 at 701.272 kb on + strand, within GFF652 at 701.273 kb on - strand, within GFF652 at 701.273 kb on - strand, within GFF652 at 701.273 kb on - strand, within GFF652 at 701.452 kb on - strand at 701.457 kb on + strand at 701.671 kb on + strand, within GFF653 at 701.672 kb on - strand, within GFF653 at 701.754 kb on - strand, within GFF653 at 701.756 kb on + strand, within GFF653 at 701.828 kb on + strand, within GFF653 at 701.828 kb on + strand, within GFF653 at 701.828 kb on + strand, within GFF653 at 701.829 kb on - strand, within GFF653 at 701.888 kb on + strand, within GFF653 at 701.889 kb on - strand, within GFF653 at 701.889 kb on - strand, within GFF653 at 701.889 kb on - strand, within GFF653 at 701.889 kb on - strand, within GFF653 at 701.889 kb on - strand, within GFF653 at 701.951 kb on + strand, within GFF653 at 701.951 kb on + strand, within GFF653 at 701.968 kb on + strand, within GFF653 at 702.126 kb on - strand, within GFF653 at 702.303 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 699,244 - -0.4 699,330 + -0.6 699,555 + GFF651 0.30 +0.4 699,555 + GFF651 0.30 +0.3 699,558 + GFF651 0.31 -0.2 699,841 - GFF651 0.61 +0.7 699,876 + GFF651 0.65 +0.1 699,949 - GFF651 0.73 +0.3 699,949 - GFF651 0.73 +0.3 699,949 - GFF651 0.73 +0.3 700,005 + GFF651 0.79 +1.6 700,006 - GFF651 0.79 -0.0 700,006 - GFF651 0.79 -0.1 700,363 - GFF652 0.13 +0.5 700,664 + GFF652 0.38 -0.1 700,665 - GFF652 0.38 -0.0 700,815 + GFF652 0.51 +1.1 700,815 + GFF652 0.51 +0.4 700,815 + GFF652 0.51 -0.7 700,816 - GFF652 0.51 -0.3 701,272 + GFF652 0.89 +0.3 701,272 + GFF652 0.89 -0.1 701,273 - GFF652 0.89 -0.5 701,273 - GFF652 0.89 +0.4 701,273 - GFF652 0.89 -2.1 701,452 - +0.4 701,457 + +1.3 701,671 + GFF653 0.21 +0.0 701,672 - GFF653 0.21 +0.2 701,754 - GFF653 0.32 -1.3 701,756 + GFF653 0.32 -0.4 701,828 + GFF653 0.41 -0.2 701,828 + GFF653 0.41 -0.5 701,828 + GFF653 0.41 +0.7 701,829 - GFF653 0.41 -0.7 701,888 + GFF653 0.49 +0.5 701,889 - GFF653 0.49 +0.1 701,889 - GFF653 0.49 -0.5 701,889 - GFF653 0.49 +0.7 701,889 - GFF653 0.49 -0.7 701,889 - GFF653 0.49 +0.8 701,951 + GFF653 0.57 +0.4 701,951 + GFF653 0.57 +0.3 701,968 + GFF653 0.59 -0.5 702,126 - GFF653 0.80 -1.7 702,303 - +0.1
Or see this region's nucleotide sequence