Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF642 and GFF643 are separated by 152 nucleotides GFF643 and GFF644 are separated by 61 nucleotides GFF644 and GFF645 are separated by 321 nucleotides GFF645 and GFF646 are separated by 117 nucleotides
GFF642 - K(+)-insensitive pyrophosphate-energized proton pump, at 688,153 to 690,294
GFF642
GFF643 - hypothetical protein, at 690,447 to 691,019
GFF643
GFF644 - Adenine permease AdeP, at 691,081 to 692,379
GFF644
GFF645 - hypothetical protein, at 692,701 to 693,132
GFF645
GFF646 - CTP synthase, at 693,250 to 694,878
GFF646
Position (kb) 691
692
693 Strain fitness (log2 ratio) -2
-1
0
1 at 690.205 kb on + strand at 690.206 kb on - strand at 690.387 kb on + strand at 690.421 kb on - strand at 690.591 kb on + strand, within GFF643 at 690.880 kb on - strand, within GFF643 at 690.880 kb on - strand, within GFF643 at 691.180 kb on + strand at 691.180 kb on + strand at 691.181 kb on - strand at 691.182 kb on + strand at 691.183 kb on - strand at 691.183 kb on - strand at 691.301 kb on - strand, within GFF644 at 691.301 kb on - strand, within GFF644 at 691.303 kb on - strand, within GFF644 at 691.340 kb on - strand, within GFF644 at 691.806 kb on + strand, within GFF644 at 691.807 kb on - strand, within GFF644 at 691.807 kb on - strand, within GFF644 at 691.807 kb on - strand, within GFF644 at 691.855 kb on - strand, within GFF644 at 691.855 kb on - strand, within GFF644 at 691.855 kb on - strand, within GFF644 at 691.996 kb on + strand, within GFF644 at 691.997 kb on - strand, within GFF644 at 692.282 kb on - strand at 692.282 kb on - strand at 692.441 kb on + strand at 692.447 kb on - strand at 692.447 kb on - strand at 692.447 kb on - strand at 692.565 kb on + strand at 692.573 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 690,205 + +0.1 690,206 - +0.6 690,387 + +1.3 690,421 - +0.4 690,591 + GFF643 0.25 -0.6 690,880 - GFF643 0.76 +0.7 690,880 - GFF643 0.76 +1.1 691,180 + -1.2 691,180 + -0.7 691,181 - -0.2 691,182 + -0.6 691,183 - -0.3 691,183 - +0.3 691,301 - GFF644 0.17 -0.6 691,301 - GFF644 0.17 +0.2 691,303 - GFF644 0.17 -0.5 691,340 - GFF644 0.20 -0.3 691,806 + GFF644 0.56 -0.6 691,807 - GFF644 0.56 +0.5 691,807 - GFF644 0.56 -0.9 691,807 - GFF644 0.56 -1.9 691,855 - GFF644 0.60 +0.4 691,855 - GFF644 0.60 -0.7 691,855 - GFF644 0.60 -0.5 691,996 + GFF644 0.70 +0.9 691,997 - GFF644 0.71 +0.1 692,282 - -0.5 692,282 - +0.9 692,441 + +0.9 692,447 - -0.1 692,447 - -0.3 692,447 - +1.0 692,565 + +0.4 692,573 - -0.4
Or see this region's nucleotide sequence