Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF639 and GFF640 are separated by 36 nucleotides GFF640 and GFF641 are separated by 259 nucleotides GFF641 and GFF642 are separated by 190 nucleotides
GFF639 - Hemin import ATP-binding protein HmuV, at 682,919 to 683,695
GFF639
GFF640 - Putative peroxiredoxin bcp, at 683,732 to 684,205
GFF640
GFF641 - hypothetical protein, at 684,465 to 687,962
GFF641
GFF642 - K(+)-insensitive pyrophosphate-energized proton pump, at 688,153 to 690,294
GFF642
Position (kb) 684
685
686
687
688 Strain fitness (log2 ratio) -2
-1
0
1 at 683.693 kb on + strand at 683.856 kb on + strand, within GFF640 at 683.856 kb on + strand, within GFF640 at 683.857 kb on - strand, within GFF640 at 683.857 kb on - strand, within GFF640 at 683.857 kb on - strand, within GFF640 at 683.868 kb on + strand, within GFF640 at 683.895 kb on + strand, within GFF640 at 683.949 kb on + strand, within GFF640 at 683.949 kb on + strand, within GFF640 at 683.950 kb on - strand, within GFF640 at 683.950 kb on - strand, within GFF640 at 683.950 kb on - strand, within GFF640 at 684.091 kb on - strand, within GFF640 at 684.096 kb on + strand, within GFF640 at 684.096 kb on + strand, within GFF640 at 684.096 kb on + strand, within GFF640 at 684.096 kb on + strand, within GFF640 at 684.291 kb on + strand at 684.340 kb on + strand at 684.340 kb on + strand at 684.340 kb on + strand at 688.114 kb on + strand at 688.115 kb on - strand at 688.121 kb on - strand at 688.136 kb on + strand at 688.150 kb on + strand at 688.151 kb on - strand at 688.297 kb on + strand at 688.298 kb on - strand at 688.312 kb on + strand at 688.576 kb on + strand, within GFF642
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 683,693 + -0.1 683,856 + GFF640 0.26 -0.0 683,856 + GFF640 0.26 +0.1 683,857 - GFF640 0.26 +0.2 683,857 - GFF640 0.26 +0.8 683,857 - GFF640 0.26 +0.6 683,868 + GFF640 0.29 -0.1 683,895 + GFF640 0.34 +0.7 683,949 + GFF640 0.46 -1.1 683,949 + GFF640 0.46 -0.9 683,950 - GFF640 0.46 -1.4 683,950 - GFF640 0.46 -0.1 683,950 - GFF640 0.46 -0.7 684,091 - GFF640 0.76 +0.7 684,096 + GFF640 0.77 -0.2 684,096 + GFF640 0.77 -0.2 684,096 + GFF640 0.77 -1.3 684,096 + GFF640 0.77 +0.8 684,291 + +0.5 684,340 + +0.3 684,340 + -0.3 684,340 + -0.3 688,114 + -2.2 688,115 - -0.4 688,121 - +0.6 688,136 + +0.4 688,150 + +1.5 688,151 - +0.1 688,297 + +0.1 688,298 - +1.0 688,312 + +0.5 688,576 + GFF642 0.20 -0.8
Or see this region's nucleotide sequence