Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF634 and GFF635 are separated by 168 nucleotides GFF635 and GFF636 are separated by 41 nucleotides
GFF634 - Thermostable carboxypeptidase 1, at 676,333 to 677,823
GFF634
GFF635 - Heme oxygenase (staphylobilin-producing), at 677,992 to 678,327
GFF635
GFF636 - Heme/hemopexin utilization protein C, at 678,369 to 680,576
GFF636
Position (kb) 677
678
679 Strain fitness (log2 ratio) -2
-1
0
1
2 at 676.992 kb on + strand, within GFF634 at 676.992 kb on + strand, within GFF634 at 676.992 kb on + strand, within GFF634 at 676.993 kb on - strand, within GFF634 at 676.994 kb on + strand, within GFF634 at 676.994 kb on + strand, within GFF634 at 676.994 kb on + strand, within GFF634 at 676.994 kb on + strand, within GFF634 at 676.994 kb on + strand, within GFF634 at 676.995 kb on - strand, within GFF634 at 676.995 kb on - strand, within GFF634 at 676.995 kb on - strand, within GFF634 at 676.995 kb on - strand, within GFF634 at 676.995 kb on - strand, within GFF634 at 676.995 kb on - strand, within GFF634 at 677.352 kb on - strand, within GFF634 at 677.372 kb on + strand, within GFF634 at 677.813 kb on + strand at 677.814 kb on - strand at 677.814 kb on - strand at 677.964 kb on + strand at 677.964 kb on + strand at 677.964 kb on + strand at 677.964 kb on + strand at 678.060 kb on + strand, within GFF635 at 678.062 kb on + strand, within GFF635 at 678.062 kb on + strand, within GFF635 at 678.062 kb on + strand, within GFF635 at 678.063 kb on - strand, within GFF635 at 678.173 kb on + strand, within GFF635 at 678.173 kb on + strand, within GFF635 at 678.174 kb on - strand, within GFF635 at 678.174 kb on - strand, within GFF635 at 678.174 kb on - strand, within GFF635 at 678.182 kb on + strand, within GFF635 at 678.182 kb on + strand, within GFF635 at 678.182 kb on + strand, within GFF635 at 678.183 kb on - strand, within GFF635 at 678.245 kb on + strand, within GFF635 at 678.246 kb on - strand, within GFF635 at 678.472 kb on + strand at 678.551 kb on - strand at 678.793 kb on + strand, within GFF636 at 678.845 kb on - strand, within GFF636 at 678.851 kb on - strand, within GFF636 at 678.851 kb on - strand, within GFF636 at 678.851 kb on - strand, within GFF636 at 678.851 kb on - strand, within GFF636 at 678.860 kb on - strand, within GFF636 at 678.902 kb on - strand, within GFF636 at 679.055 kb on - strand, within GFF636 at 679.138 kb on + strand, within GFF636 at 679.159 kb on + strand, within GFF636 at 679.252 kb on + strand, within GFF636 at 679.261 kb on + strand, within GFF636 at 679.261 kb on + strand, within GFF636 at 679.297 kb on + strand, within GFF636 at 679.298 kb on - strand, within GFF636
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 676,992 + GFF634 0.44 -1.3 676,992 + GFF634 0.44 +0.3 676,992 + GFF634 0.44 -0.7 676,993 - GFF634 0.44 -0.1 676,994 + GFF634 0.44 -0.9 676,994 + GFF634 0.44 -0.2 676,994 + GFF634 0.44 +0.9 676,994 + GFF634 0.44 -0.7 676,994 + GFF634 0.44 +0.1 676,995 - GFF634 0.44 -1.0 676,995 - GFF634 0.44 -0.4 676,995 - GFF634 0.44 +0.4 676,995 - GFF634 0.44 -0.0 676,995 - GFF634 0.44 +0.6 676,995 - GFF634 0.44 -1.9 677,352 - GFF634 0.68 +0.2 677,372 + GFF634 0.70 +0.6 677,813 + -1.9 677,814 - +1.9 677,814 - -0.8 677,964 + +1.3 677,964 + -1.3 677,964 + +0.0 677,964 + +0.3 678,060 + GFF635 0.20 -0.4 678,062 + GFF635 0.21 -0.4 678,062 + GFF635 0.21 +0.2 678,062 + GFF635 0.21 +1.2 678,063 - GFF635 0.21 -0.5 678,173 + GFF635 0.54 -0.8 678,173 + GFF635 0.54 -0.7 678,174 - GFF635 0.54 -0.7 678,174 - GFF635 0.54 +1.0 678,174 - GFF635 0.54 +0.4 678,182 + GFF635 0.57 -0.2 678,182 + GFF635 0.57 -1.6 678,182 + GFF635 0.57 -0.6 678,183 - GFF635 0.57 +1.7 678,245 + GFF635 0.75 -0.4 678,246 - GFF635 0.76 +0.2 678,472 + +0.3 678,551 - +0.3 678,793 + GFF636 0.19 +1.9 678,845 - GFF636 0.22 -0.0 678,851 - GFF636 0.22 +1.3 678,851 - GFF636 0.22 +1.0 678,851 - GFF636 0.22 +0.9 678,851 - GFF636 0.22 +0.1 678,860 - GFF636 0.22 +0.1 678,902 - GFF636 0.24 -0.1 679,055 - GFF636 0.31 +0.3 679,138 + GFF636 0.35 +0.3 679,159 + GFF636 0.36 +1.5 679,252 + GFF636 0.40 -1.4 679,261 + GFF636 0.40 +1.3 679,261 + GFF636 0.40 -0.0 679,297 + GFF636 0.42 +0.0 679,298 - GFF636 0.42 -0.1
Or see this region's nucleotide sequence