Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF627 and GFF628 are separated by 117 nucleotides GFF628 and GFF629 are separated by 12 nucleotides GFF629 and GFF630 are separated by 17 nucleotides
GFF627 - Glutamine--fructose-6-phosphate aminotransferase [isomerizing], at 666,979 to 668,802
GFF627
GFF628 - hypothetical protein, at 668,920 to 670,098
GFF628
GFF629 - hypothetical protein, at 670,111 to 670,563
GFF629
GFF630 - ATP-dependent DNA helicase RecG, at 670,581 to 672,674
GFF630
Position (kb) 668
669
670
671 Strain fitness (log2 ratio) -1
0
1 at 668.800 kb on + strand at 668.800 kb on + strand at 668.801 kb on - strand at 668.885 kb on + strand at 669.015 kb on + strand at 669.015 kb on + strand at 669.045 kb on - strand, within GFF628 at 669.088 kb on + strand, within GFF628 at 669.089 kb on - strand, within GFF628 at 669.089 kb on - strand, within GFF628 at 669.124 kb on + strand, within GFF628 at 669.124 kb on + strand, within GFF628 at 669.124 kb on + strand, within GFF628 at 669.124 kb on + strand, within GFF628 at 669.125 kb on - strand, within GFF628 at 669.125 kb on - strand, within GFF628 at 669.125 kb on - strand, within GFF628 at 669.125 kb on - strand, within GFF628 at 669.125 kb on - strand, within GFF628 at 669.290 kb on - strand, within GFF628 at 669.463 kb on + strand, within GFF628 at 669.463 kb on + strand, within GFF628 at 669.464 kb on - strand, within GFF628 at 670.200 kb on - strand, within GFF629 at 670.200 kb on - strand, within GFF629 at 670.200 kb on - strand, within GFF629 at 670.378 kb on + strand, within GFF629 at 670.378 kb on + strand, within GFF629
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 668,800 + +0.0 668,800 + -0.8 668,801 - -0.9 668,885 + -0.4 669,015 + -1.1 669,015 + +0.7 669,045 - GFF628 0.11 +0.8 669,088 + GFF628 0.14 -0.8 669,089 - GFF628 0.14 +0.8 669,089 - GFF628 0.14 +0.4 669,124 + GFF628 0.17 +0.0 669,124 + GFF628 0.17 -1.1 669,124 + GFF628 0.17 +0.1 669,124 + GFF628 0.17 -0.8 669,125 - GFF628 0.17 +0.5 669,125 - GFF628 0.17 -0.7 669,125 - GFF628 0.17 -0.5 669,125 - GFF628 0.17 +0.2 669,125 - GFF628 0.17 +1.4 669,290 - GFF628 0.31 +0.7 669,463 + GFF628 0.46 +0.2 669,463 + GFF628 0.46 -1.4 669,464 - GFF628 0.46 +0.5 670,200 - GFF629 0.20 +1.1 670,200 - GFF629 0.20 -0.4 670,200 - GFF629 0.20 -0.3 670,378 + GFF629 0.59 +0.1 670,378 + GFF629 0.59 -0.1
Or see this region's nucleotide sequence