Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF614 and GFF615 are separated by 17 nucleotides GFF615 and GFF616 are separated by 194 nucleotides GFF616 and GFF617 overlap by 4 nucleotides
GFF614 - hypothetical protein, at 653,416 to 654,372
GFF614
GFF615 - Ubiquinone hydroxylase UbiL, at 654,390 to 655,568
GFF615
GFF616 - hypothetical protein, at 655,763 to 656,518
GFF616
GFF617 - putative oxidoreductase YgfF, at 656,515 to 657,270
GFF617
Position (kb) 654
655
656 Strain fitness (log2 ratio) -2
-1
0
1
2 at 653.536 kb on + strand, within GFF614 at 653.536 kb on + strand, within GFF614 at 653.536 kb on + strand, within GFF614 at 653.536 kb on + strand, within GFF614 at 653.537 kb on - strand, within GFF614 at 653.537 kb on - strand, within GFF614 at 653.560 kb on + strand, within GFF614 at 653.560 kb on + strand, within GFF614 at 653.689 kb on - strand, within GFF614 at 653.726 kb on - strand, within GFF614 at 653.740 kb on + strand, within GFF614 at 653.741 kb on - strand, within GFF614 at 653.741 kb on - strand, within GFF614 at 653.820 kb on + strand, within GFF614 at 654.189 kb on + strand, within GFF614 at 654.190 kb on - strand, within GFF614 at 654.190 kb on - strand, within GFF614 at 654.190 kb on - strand, within GFF614 at 656.411 kb on + strand, within GFF616 at 656.411 kb on + strand, within GFF616 at 656.411 kb on + strand, within GFF616 at 656.412 kb on - strand, within GFF616 at 656.412 kb on - strand, within GFF616 at 656.412 kb on - strand, within GFF616 at 656.417 kb on + strand, within GFF616 at 656.417 kb on + strand, within GFF616 at 656.418 kb on - strand, within GFF616 at 656.418 kb on - strand, within GFF616
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 653,536 + GFF614 0.13 -0.5 653,536 + GFF614 0.13 +0.3 653,536 + GFF614 0.13 -0.9 653,536 + GFF614 0.13 +0.4 653,537 - GFF614 0.13 -2.5 653,537 - GFF614 0.13 +0.2 653,560 + GFF614 0.15 +2.6 653,560 + GFF614 0.15 -1.3 653,689 - GFF614 0.29 +1.1 653,726 - GFF614 0.32 -0.1 653,740 + GFF614 0.34 +0.7 653,741 - GFF614 0.34 -1.3 653,741 - GFF614 0.34 +0.3 653,820 + GFF614 0.42 +0.3 654,189 + GFF614 0.81 -1.1 654,190 - GFF614 0.81 -0.7 654,190 - GFF614 0.81 +1.1 654,190 - GFF614 0.81 -1.3 656,411 + GFF616 0.86 -1.1 656,411 + GFF616 0.86 -0.3 656,411 + GFF616 0.86 +1.0 656,412 - GFF616 0.86 -1.2 656,412 - GFF616 0.86 +0.9 656,412 - GFF616 0.86 +0.7 656,417 + GFF616 0.87 -0.9 656,417 + GFF616 0.87 +0.3 656,418 - GFF616 0.87 -0.5 656,418 - GFF616 0.87 -0.1
Or see this region's nucleotide sequence