Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF603 and GFF604 are separated by 88 nucleotides GFF604 and GFF605 are separated by 75 nucleotides GFF605 and GFF606 are separated by 203 nucleotides
GFF603 - hypothetical protein, at 643,591 to 644,541
GFF603
GFF604 - hypothetical protein, at 644,630 to 645,103
GFF604
GFF605 - Acetoacetyl-CoA reductase, at 645,179 to 645,901
GFF605
GFF606 - Acetyl-CoA acetyltransferase, at 646,105 to 647,283
GFF606
Position (kb) 645
646 Strain fitness (log2 ratio) -1
0
1
2 at 644.599 kb on - strand at 644.599 kb on - strand at 644.751 kb on - strand, within GFF604 at 644.775 kb on - strand, within GFF604 at 644.775 kb on - strand, within GFF604 at 644.775 kb on - strand, within GFF604 at 644.775 kb on - strand, within GFF604 at 644.778 kb on - strand, within GFF604 at 644.882 kb on + strand, within GFF604 at 644.886 kb on + strand, within GFF604 at 645.026 kb on + strand, within GFF604 at 645.027 kb on - strand, within GFF604 at 645.027 kb on - strand, within GFF604 at 645.027 kb on - strand, within GFF604 at 645.189 kb on + strand at 645.189 kb on + strand at 645.190 kb on - strand at 645.319 kb on + strand, within GFF605 at 645.319 kb on + strand, within GFF605 at 645.462 kb on + strand, within GFF605 at 645.747 kb on + strand, within GFF605 at 645.925 kb on + strand at 645.926 kb on - strand at 645.990 kb on + strand at 645.990 kb on + strand at 646.285 kb on - strand, within GFF606 at 646.631 kb on + strand, within GFF606 at 646.631 kb on + strand, within GFF606 at 646.631 kb on + strand, within GFF606 at 646.632 kb on - strand, within GFF606
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 644,599 - -0.6 644,599 - -1.4 644,751 - GFF604 0.26 +0.1 644,775 - GFF604 0.31 +1.9 644,775 - GFF604 0.31 +0.0 644,775 - GFF604 0.31 -0.2 644,775 - GFF604 0.31 -0.2 644,778 - GFF604 0.31 +0.4 644,882 + GFF604 0.53 +0.7 644,886 + GFF604 0.54 +0.4 645,026 + GFF604 0.84 -0.2 645,027 - GFF604 0.84 +0.9 645,027 - GFF604 0.84 -0.9 645,027 - GFF604 0.84 -0.4 645,189 + -0.3 645,189 + +0.1 645,190 - +0.4 645,319 + GFF605 0.19 -0.3 645,319 + GFF605 0.19 -0.2 645,462 + GFF605 0.39 -0.4 645,747 + GFF605 0.79 -0.1 645,925 + -0.0 645,926 - +0.1 645,990 + +0.4 645,990 + -0.0 646,285 - GFF606 0.15 -1.0 646,631 + GFF606 0.45 +0.4 646,631 + GFF606 0.45 +0.3 646,631 + GFF606 0.45 -1.7 646,632 - GFF606 0.45 +0.3
Or see this region's nucleotide sequence