Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF591 and GFF592 are separated by 79 nucleotides GFF592 and GFF593 are separated by 324 nucleotides GFF593 and GFF594 are separated by 112 nucleotides GFF594 and GFF595 are separated by 24 nucleotides
GFF591 - Aspartate/glutamate leucyltransferase, at 632,085 to 632,834
GFF591
GFF592 - hypothetical protein, at 632,914 to 633,453
GFF592
GFF593 - Polar-differentiation response regulator DivK, at 633,778 to 634,146
GFF593
GFF594 - hypothetical protein, at 634,259 to 634,585
GFF594
GFF595 - DNA polymerase IV, at 634,610 to 635,911
GFF595
Position (kb) 633
634
635 Strain fitness (log2 ratio) -1
0
1 at 633.093 kb on - strand, within GFF592 at 633.183 kb on - strand, within GFF592 at 633.183 kb on - strand, within GFF592 at 633.183 kb on - strand, within GFF592 at 633.185 kb on + strand, within GFF592 at 633.446 kb on + strand at 633.447 kb on - strand at 633.546 kb on + strand at 633.647 kb on - strand at 633.731 kb on - strand at 633.790 kb on - strand at 634.232 kb on + strand at 634.232 kb on + strand at 634.583 kb on + strand at 634.583 kb on + strand at 634.766 kb on + strand, within GFF595 at 634.859 kb on + strand, within GFF595 at 634.860 kb on - strand, within GFF595
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 633,093 - GFF592 0.33 +1.5 633,183 - GFF592 0.50 -0.9 633,183 - GFF592 0.50 +0.1 633,183 - GFF592 0.50 +0.2 633,185 + GFF592 0.50 +0.8 633,446 + +0.2 633,447 - -0.2 633,546 + +0.2 633,647 - +0.5 633,731 - -0.0 633,790 - +1.3 634,232 + -0.7 634,232 + -0.1 634,583 + +0.8 634,583 + -0.1 634,766 + GFF595 0.12 -0.0 634,859 + GFF595 0.19 -0.5 634,860 - GFF595 0.19 +0.1
Or see this region's nucleotide sequence