Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF581 and GFF582 are separated by 9 nucleotides GFF582 and GFF583 are separated by 172 nucleotides GFF583 and GFF584 are separated by 66 nucleotides GFF584 and GFF585 are separated by 88 nucleotides
GFF581 - Thiamine-monophosphate kinase, at 619,893 to 620,888
GFF581
GFF582 - hypothetical protein, at 620,898 to 621,335
GFF582
GFF583 - DNA polymerase III subunit alpha, at 621,508 to 624,975
GFF583
GFF584 - hypothetical protein, at 625,042 to 625,866
GFF584
GFF585 - hypothetical protein, at 625,955 to 626,968
GFF585
Position (kb) 621
622
623
624
625 Strain fitness (log2 ratio) -1
0
1 at 621.070 kb on + strand, within GFF582 at 621.071 kb on - strand, within GFF582 at 621.366 kb on + strand at 621.366 kb on + strand at 621.367 kb on - strand at 621.438 kb on - strand at 621.458 kb on + strand at 624.985 kb on + strand at 625.000 kb on - strand at 625.396 kb on + strand, within GFF584 at 625.396 kb on + strand, within GFF584 at 625.396 kb on + strand, within GFF584 at 625.396 kb on + strand, within GFF584 at 625.396 kb on + strand, within GFF584 at 625.397 kb on - strand, within GFF584 at 625.397 kb on - strand, within GFF584 at 625.531 kb on + strand, within GFF584 at 625.532 kb on - strand, within GFF584 at 625.532 kb on - strand, within GFF584 at 625.774 kb on + strand, within GFF584 at 625.774 kb on + strand, within GFF584 at 625.775 kb on - strand, within GFF584 at 625.775 kb on - strand, within GFF584 at 625.775 kb on - strand, within GFF584
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 621,070 + GFF582 0.39 -0.1 621,071 - GFF582 0.39 -0.0 621,366 + +1.2 621,366 + -0.4 621,367 - -0.8 621,438 - -0.8 621,458 + +0.4 624,985 + +0.6 625,000 - -0.7 625,396 + GFF584 0.43 +0.7 625,396 + GFF584 0.43 -0.1 625,396 + GFF584 0.43 -0.0 625,396 + GFF584 0.43 -0.0 625,396 + GFF584 0.43 -0.7 625,397 - GFF584 0.43 -0.4 625,397 - GFF584 0.43 +0.2 625,531 + GFF584 0.59 +0.4 625,532 - GFF584 0.59 +0.7 625,532 - GFF584 0.59 +0.0 625,774 + GFF584 0.89 +0.2 625,774 + GFF584 0.89 +0.2 625,775 - GFF584 0.89 +0.4 625,775 - GFF584 0.89 -0.5 625,775 - GFF584 0.89 -0.2
Or see this region's nucleotide sequence