Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF510 and GFF511 are separated by 161 nucleotides GFF511 and GFF512 are separated by 4 nucleotides
GFF510 - Methionine aminotransferase, at 539,919 to 541,103
GFF510
GFF511 - Multidrug resistance protein MdtA, at 541,265 to 542,440
GFF511
GFF512 - Multidrug resistance protein MdtC, at 542,445 to 545,603
GFF512
Position (kb) 541
542
543 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 540.309 kb on + strand, within GFF510 at 540.309 kb on + strand, within GFF510 at 540.310 kb on - strand, within GFF510 at 540.310 kb on - strand, within GFF510 at 540.498 kb on + strand, within GFF510 at 540.519 kb on + strand, within GFF510 at 540.620 kb on - strand, within GFF510 at 540.787 kb on - strand, within GFF510 at 540.885 kb on + strand, within GFF510 at 540.885 kb on + strand, within GFF510 at 540.996 kb on + strand at 541.151 kb on + strand at 541.152 kb on - strand at 541.152 kb on - strand at 541.170 kb on + strand at 541.378 kb on + strand at 541.378 kb on + strand at 541.602 kb on - strand, within GFF511 at 541.706 kb on + strand, within GFF511 at 541.706 kb on + strand, within GFF511 at 541.707 kb on - strand, within GFF511 at 541.838 kb on + strand, within GFF511 at 541.839 kb on - strand, within GFF511 at 541.842 kb on - strand, within GFF511 at 541.842 kb on - strand, within GFF511 at 541.952 kb on + strand, within GFF511 at 541.952 kb on + strand, within GFF511 at 541.952 kb on + strand, within GFF511 at 541.952 kb on + strand, within GFF511 at 541.952 kb on + strand, within GFF511 at 541.952 kb on + strand, within GFF511 at 541.952 kb on + strand, within GFF511 at 541.952 kb on + strand, within GFF511 at 541.952 kb on + strand, within GFF511 at 541.952 kb on + strand, within GFF511 at 541.953 kb on - strand, within GFF511 at 541.953 kb on - strand, within GFF511 at 541.953 kb on - strand, within GFF511 at 541.953 kb on - strand, within GFF511 at 541.953 kb on - strand, within GFF511 at 541.953 kb on - strand, within GFF511 at 541.953 kb on - strand, within GFF511 at 541.980 kb on - strand, within GFF511 at 541.980 kb on - strand, within GFF511 at 541.980 kb on - strand, within GFF511 at 542.910 kb on + strand, within GFF512 at 542.910 kb on + strand, within GFF512 at 542.910 kb on + strand, within GFF512 at 542.910 kb on + strand, within GFF512 at 542.911 kb on - strand, within GFF512 at 542.973 kb on + strand, within GFF512 at 542.973 kb on + strand, within GFF512 at 542.973 kb on + strand, within GFF512 at 542.974 kb on - strand, within GFF512 at 542.988 kb on + strand, within GFF512 at 542.988 kb on + strand, within GFF512 at 542.988 kb on + strand, within GFF512 at 542.988 kb on + strand, within GFF512 at 542.988 kb on + strand, within GFF512 at 543.127 kb on + strand, within GFF512 at 543.127 kb on + strand, within GFF512 at 543.128 kb on - strand, within GFF512 at 543.128 kb on - strand, within GFF512 at 543.128 kb on - strand, within GFF512 at 543.267 kb on - strand, within GFF512 at 543.267 kb on - strand, within GFF512
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 540,309 + GFF510 0.33 -0.3 540,309 + GFF510 0.33 -0.4 540,310 - GFF510 0.33 +0.1 540,310 - GFF510 0.33 +0.6 540,498 + GFF510 0.49 +0.6 540,519 + GFF510 0.51 -0.3 540,620 - GFF510 0.59 +1.2 540,787 - GFF510 0.73 +0.3 540,885 + GFF510 0.82 -1.2 540,885 + GFF510 0.82 -0.4 540,996 + +1.9 541,151 + +0.8 541,152 - -0.9 541,152 - -0.1 541,170 + +0.4 541,378 + -1.8 541,378 + -0.2 541,602 - GFF511 0.29 +0.1 541,706 + GFF511 0.38 +0.3 541,706 + GFF511 0.38 +1.2 541,707 - GFF511 0.38 -1.0 541,838 + GFF511 0.49 +0.7 541,839 - GFF511 0.49 -1.4 541,842 - GFF511 0.49 +1.3 541,842 - GFF511 0.49 +0.6 541,952 + GFF511 0.58 -1.6 541,952 + GFF511 0.58 -0.4 541,952 + GFF511 0.58 +0.3 541,952 + GFF511 0.58 -0.8 541,952 + GFF511 0.58 +0.2 541,952 + GFF511 0.58 +1.0 541,952 + GFF511 0.58 +1.3 541,952 + GFF511 0.58 +0.0 541,952 + GFF511 0.58 +0.3 541,952 + GFF511 0.58 -1.0 541,953 - GFF511 0.59 +1.0 541,953 - GFF511 0.59 -0.5 541,953 - GFF511 0.59 -0.3 541,953 - GFF511 0.59 +0.2 541,953 - GFF511 0.59 -0.5 541,953 - GFF511 0.59 -1.1 541,953 - GFF511 0.59 -0.6 541,980 - GFF511 0.61 -2.3 541,980 - GFF511 0.61 +1.0 541,980 - GFF511 0.61 +1.1 542,910 + GFF512 0.15 +0.2 542,910 + GFF512 0.15 -0.5 542,910 + GFF512 0.15 -0.5 542,910 + GFF512 0.15 +0.4 542,911 - GFF512 0.15 -1.4 542,973 + GFF512 0.17 -0.6 542,973 + GFF512 0.17 -2.8 542,973 + GFF512 0.17 +0.1 542,974 - GFF512 0.17 +0.3 542,988 + GFF512 0.17 +0.9 542,988 + GFF512 0.17 -1.0 542,988 + GFF512 0.17 -3.2 542,988 + GFF512 0.17 -1.4 542,988 + GFF512 0.17 -0.3 543,127 + GFF512 0.22 -0.0 543,127 + GFF512 0.22 -0.2 543,128 - GFF512 0.22 -0.3 543,128 - GFF512 0.22 -0.5 543,128 - GFF512 0.22 -0.1 543,267 - GFF512 0.26 -0.2 543,267 - GFF512 0.26 -0.1
Or see this region's nucleotide sequence