Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF505 and GFF506 are separated by 46 nucleotides GFF506 and GFF507 are separated by 10 nucleotides GFF507 and GFF508 are separated by 145 nucleotides GFF508 and GFF509 are separated by 91 nucleotides GFF509 and GFF510 are separated by 48 nucleotides
GFF505 - hypothetical protein, at 536,717 to 536,959
GFF505
GFF506 - hypothetical protein, at 537,006 to 537,233
GFF506
GFF507 - hypothetical protein, at 537,244 to 537,531
GFF507
GFF508 - K(+)/H(+) antiporter NhaP2, at 537,677 to 539,455
GFF508
GFF509 - hypothetical protein, at 539,547 to 539,870
GFF509
GFF510 - Methionine aminotransferase, at 539,919 to 541,103
GFF510
Position (kb) 537
538
539
540 Strain fitness (log2 ratio) -2
-1
0
1 at 536.705 kb on + strand at 536.705 kb on + strand at 536.705 kb on + strand at 536.706 kb on - strand at 537.003 kb on + strand at 537.003 kb on + strand at 537.005 kb on + strand at 537.005 kb on + strand at 537.330 kb on - strand, within GFF507 at 537.375 kb on - strand, within GFF507 at 537.375 kb on - strand, within GFF507 at 537.375 kb on - strand, within GFF507 at 537.504 kb on - strand at 537.504 kb on - strand at 537.538 kb on - strand at 537.601 kb on - strand at 537.610 kb on - strand at 537.852 kb on - strand at 537.863 kb on + strand, within GFF508 at 537.863 kb on + strand, within GFF508 at 537.863 kb on + strand, within GFF508 at 537.863 kb on + strand, within GFF508 at 537.864 kb on - strand, within GFF508 at 538.577 kb on + strand, within GFF508 at 538.577 kb on + strand, within GFF508 at 538.578 kb on - strand, within GFF508 at 538.773 kb on - strand, within GFF508 at 538.773 kb on - strand, within GFF508 at 538.773 kb on - strand, within GFF508 at 538.773 kb on - strand, within GFF508 at 538.938 kb on - strand, within GFF508 at 539.073 kb on - strand, within GFF508 at 539.204 kb on + strand, within GFF508 at 539.205 kb on - strand, within GFF508 at 539.354 kb on + strand at 539.354 kb on + strand at 539.354 kb on + strand at 539.355 kb on - strand at 539.453 kb on + strand at 539.453 kb on + strand at 539.453 kb on + strand at 539.530 kb on - strand at 539.868 kb on + strand at 539.869 kb on - strand at 539.869 kb on - strand at 539.936 kb on + strand at 539.937 kb on - strand at 539.937 kb on - strand at 539.962 kb on - strand at 540.017 kb on - strand at 540.114 kb on + strand, within GFF510 at 540.115 kb on - strand, within GFF510 at 540.165 kb on + strand, within GFF510 at 540.309 kb on + strand, within GFF510 at 540.309 kb on + strand, within GFF510 at 540.310 kb on - strand, within GFF510 at 540.310 kb on - strand, within GFF510
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 536,705 + +1.0 536,705 + +0.1 536,705 + -2.7 536,706 - -0.3 537,003 + -0.5 537,003 + +0.5 537,005 + -0.6 537,005 + +0.7 537,330 - GFF507 0.30 -1.1 537,375 - GFF507 0.45 +0.4 537,375 - GFF507 0.45 -0.3 537,375 - GFF507 0.45 -0.5 537,504 - +0.4 537,504 - +0.9 537,538 - +0.8 537,601 - -0.5 537,610 - -0.4 537,852 - +0.3 537,863 + GFF508 0.10 +0.1 537,863 + GFF508 0.10 -1.2 537,863 + GFF508 0.10 -1.2 537,863 + GFF508 0.10 +0.3 537,864 - GFF508 0.11 +0.7 538,577 + GFF508 0.51 +1.3 538,577 + GFF508 0.51 +0.8 538,578 - GFF508 0.51 +0.1 538,773 - GFF508 0.62 +0.1 538,773 - GFF508 0.62 +0.5 538,773 - GFF508 0.62 -0.1 538,773 - GFF508 0.62 -1.2 538,938 - GFF508 0.71 +0.9 539,073 - GFF508 0.78 +0.2 539,204 + GFF508 0.86 +0.4 539,205 - GFF508 0.86 -0.7 539,354 + -1.2 539,354 + +0.1 539,354 + -0.3 539,355 - -0.3 539,453 + -1.0 539,453 + -0.3 539,453 + -0.7 539,530 - -1.1 539,868 + -2.3 539,869 - +0.3 539,869 - +0.0 539,936 + -0.1 539,937 - +0.7 539,937 - +0.2 539,962 - -0.1 540,017 - +0.1 540,114 + GFF510 0.16 +1.1 540,115 - GFF510 0.17 +0.2 540,165 + GFF510 0.21 +1.2 540,309 + GFF510 0.33 -0.3 540,309 + GFF510 0.33 -0.4 540,310 - GFF510 0.33 +0.1 540,310 - GFF510 0.33 +0.6
Or see this region's nucleotide sequence