Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF501 and GFF502 are separated by 72 nucleotides GFF502 and GFF503 are separated by 153 nucleotides
GFF501 - Nitronate monooxygenase, at 532,183 to 533,343
GFF501
GFF502 - HTH-type transcriptional regulator GltR, at 533,416 to 534,240
GFF502
GFF503 - Hercynine oxygenase, at 534,394 to 535,704
GFF503
Position (kb) 533
534
535 Strain fitness (log2 ratio) -2
-1
0
1 at 532.820 kb on - strand, within GFF501 at 532.901 kb on - strand, within GFF501 at 532.990 kb on - strand, within GFF501 at 532.991 kb on + strand, within GFF501 at 532.991 kb on + strand, within GFF501 at 532.991 kb on + strand, within GFF501 at 532.991 kb on + strand, within GFF501 at 532.991 kb on + strand, within GFF501 at 532.992 kb on - strand, within GFF501 at 532.994 kb on + strand, within GFF501 at 533.138 kb on + strand, within GFF501 at 533.138 kb on + strand, within GFF501 at 533.138 kb on + strand, within GFF501 at 533.138 kb on + strand, within GFF501 at 533.138 kb on + strand, within GFF501 at 533.138 kb on + strand, within GFF501 at 533.138 kb on + strand, within GFF501 at 533.138 kb on + strand, within GFF501 at 533.139 kb on - strand, within GFF501 at 533.139 kb on - strand, within GFF501 at 533.139 kb on - strand, within GFF501 at 533.139 kb on - strand, within GFF501 at 533.345 kb on - strand at 533.617 kb on + strand, within GFF502 at 534.324 kb on + strand at 534.325 kb on - strand at 534.325 kb on - strand at 534.351 kb on - strand at 534.643 kb on + strand, within GFF503 at 534.685 kb on + strand, within GFF503 at 534.689 kb on - strand, within GFF503 at 534.766 kb on + strand, within GFF503 at 534.767 kb on - strand, within GFF503 at 534.767 kb on - strand, within GFF503 at 534.940 kb on + strand, within GFF503 at 534.997 kb on + strand, within GFF503 at 534.998 kb on - strand, within GFF503 at 535.045 kb on + strand, within GFF503 at 535.045 kb on + strand, within GFF503 at 535.045 kb on + strand, within GFF503 at 535.046 kb on - strand, within GFF503 at 535.207 kb on + strand, within GFF503 at 535.207 kb on + strand, within GFF503 at 535.208 kb on - strand, within GFF503 at 535.223 kb on - strand, within GFF503
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 532,820 - GFF501 0.55 -0.8 532,901 - GFF501 0.62 +0.3 532,990 - GFF501 0.70 -0.6 532,991 + GFF501 0.70 +1.3 532,991 + GFF501 0.70 +0.9 532,991 + GFF501 0.70 -2.2 532,991 + GFF501 0.70 +0.6 532,991 + GFF501 0.70 -0.4 532,992 - GFF501 0.70 +1.4 532,994 + GFF501 0.70 -2.1 533,138 + GFF501 0.82 +0.4 533,138 + GFF501 0.82 +0.4 533,138 + GFF501 0.82 +0.3 533,138 + GFF501 0.82 +0.7 533,138 + GFF501 0.82 -0.4 533,138 + GFF501 0.82 +0.6 533,138 + GFF501 0.82 -0.3 533,138 + GFF501 0.82 +1.0 533,139 - GFF501 0.82 +0.6 533,139 - GFF501 0.82 +0.1 533,139 - GFF501 0.82 +0.6 533,139 - GFF501 0.82 -0.6 533,345 - -0.2 533,617 + GFF502 0.24 -0.6 534,324 + -0.6 534,325 - -1.1 534,325 - +0.3 534,351 - -0.5 534,643 + GFF503 0.19 +0.8 534,685 + GFF503 0.22 -0.6 534,689 - GFF503 0.23 +0.9 534,766 + GFF503 0.28 +0.1 534,767 - GFF503 0.28 -0.4 534,767 - GFF503 0.28 -0.1 534,940 + GFF503 0.42 +0.2 534,997 + GFF503 0.46 +0.8 534,998 - GFF503 0.46 -1.3 535,045 + GFF503 0.50 -0.4 535,045 + GFF503 0.50 -0.1 535,045 + GFF503 0.50 +0.1 535,046 - GFF503 0.50 -0.1 535,207 + GFF503 0.62 -1.0 535,207 + GFF503 0.62 +0.7 535,208 - GFF503 0.62 -0.2 535,223 - GFF503 0.63 +0.7
Or see this region's nucleotide sequence