Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF498 and GFF499 are separated by 653 nucleotides GFF499 and GFF500 are separated by 49 nucleotides GFF500 and GFF501 are separated by 101 nucleotides
GFF498 - Leu/Ile/Val-binding protein, at 529,058 to 530,218
GFF498
GFF499 - hypothetical protein, at 530,872 to 531,072
GFF499
GFF500 - Phthalate 4,5-dioxygenase oxygenase reductase subunit, at 531,122 to 532,081
GFF500
GFF501 - Nitronate monooxygenase, at 532,183 to 533,343
GFF501
Position (kb) 531
532
533 Strain fitness (log2 ratio) -2
-1
0
1 at 530.218 kb on + strand at 530.219 kb on - strand at 530.291 kb on - strand at 530.359 kb on + strand at 530.359 kb on + strand at 530.359 kb on + strand at 530.360 kb on - strand at 530.360 kb on - strand at 530.407 kb on + strand at 530.604 kb on - strand at 531.020 kb on + strand, within GFF499 at 531.021 kb on - strand, within GFF499 at 531.339 kb on - strand, within GFF500 at 531.339 kb on - strand, within GFF500 at 531.494 kb on + strand, within GFF500 at 531.494 kb on + strand, within GFF500 at 531.495 kb on - strand, within GFF500 at 531.579 kb on + strand, within GFF500 at 531.579 kb on + strand, within GFF500 at 531.579 kb on + strand, within GFF500 at 531.579 kb on + strand, within GFF500 at 531.579 kb on + strand, within GFF500 at 531.580 kb on - strand, within GFF500 at 531.580 kb on - strand, within GFF500 at 531.583 kb on - strand, within GFF500 at 531.658 kb on - strand, within GFF500 at 531.658 kb on - strand, within GFF500 at 531.882 kb on + strand, within GFF500 at 531.883 kb on - strand, within GFF500 at 531.919 kb on - strand, within GFF500 at 532.820 kb on - strand, within GFF501 at 532.901 kb on - strand, within GFF501 at 532.990 kb on - strand, within GFF501 at 532.991 kb on + strand, within GFF501 at 532.991 kb on + strand, within GFF501 at 532.991 kb on + strand, within GFF501 at 532.991 kb on + strand, within GFF501 at 532.991 kb on + strand, within GFF501 at 532.992 kb on - strand, within GFF501 at 532.994 kb on + strand, within GFF501
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 530,218 + +0.9 530,219 - +0.7 530,291 - -0.6 530,359 + +0.1 530,359 + +0.5 530,359 + +0.7 530,360 - -0.2 530,360 - -0.1 530,407 + +0.8 530,604 - +1.1 531,020 + GFF499 0.74 -0.5 531,021 - GFF499 0.74 -0.3 531,339 - GFF500 0.23 +0.4 531,339 - GFF500 0.23 +0.4 531,494 + GFF500 0.39 +0.1 531,494 + GFF500 0.39 -2.0 531,495 - GFF500 0.39 -1.6 531,579 + GFF500 0.48 +1.0 531,579 + GFF500 0.48 +0.8 531,579 + GFF500 0.48 +0.1 531,579 + GFF500 0.48 +0.3 531,579 + GFF500 0.48 -1.2 531,580 - GFF500 0.48 -0.1 531,580 - GFF500 0.48 +0.7 531,583 - GFF500 0.48 +0.0 531,658 - GFF500 0.56 -0.1 531,658 - GFF500 0.56 +0.5 531,882 + GFF500 0.79 +0.8 531,883 - GFF500 0.79 -0.7 531,919 - GFF500 0.83 -1.0 532,820 - GFF501 0.55 -0.8 532,901 - GFF501 0.62 +0.3 532,990 - GFF501 0.70 -0.6 532,991 + GFF501 0.70 +1.3 532,991 + GFF501 0.70 +0.9 532,991 + GFF501 0.70 -2.2 532,991 + GFF501 0.70 +0.6 532,991 + GFF501 0.70 -0.4 532,992 - GFF501 0.70 +1.4 532,994 + GFF501 0.70 -2.1
Or see this region's nucleotide sequence