Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF496 and GFF497 are separated by 94 nucleotides GFF497 and GFF498 are separated by 14 nucleotides GFF498 and GFF499 are separated by 653 nucleotides GFF499 and GFF500 are separated by 49 nucleotides
GFF496 - Long-chain-fatty-acid--CoA ligase, at 526,640 to 528,196
GFF496
GFF497 - hypothetical protein, at 528,291 to 529,043
GFF497
GFF498 - Leu/Ile/Val-binding protein, at 529,058 to 530,218
GFF498
GFF499 - hypothetical protein, at 530,872 to 531,072
GFF499
GFF500 - Phthalate 4,5-dioxygenase oxygenase reductase subunit, at 531,122 to 532,081
GFF500
Position (kb) 529
530
531 Strain fitness (log2 ratio) -1
0
1
2 at 528.115 kb on + strand at 528.115 kb on + strand at 528.116 kb on - strand at 528.125 kb on + strand at 528.126 kb on + strand at 528.127 kb on - strand at 528.281 kb on + strand at 528.281 kb on + strand at 528.281 kb on + strand at 528.282 kb on - strand at 528.340 kb on + strand at 528.341 kb on - strand at 528.681 kb on + strand, within GFF497 at 528.681 kb on + strand, within GFF497 at 528.681 kb on + strand, within GFF497 at 528.681 kb on + strand, within GFF497 at 528.681 kb on + strand, within GFF497 at 528.694 kb on - strand, within GFF497 at 528.797 kb on + strand, within GFF497 at 528.798 kb on - strand, within GFF497 at 529.190 kb on - strand, within GFF498 at 529.272 kb on + strand, within GFF498 at 529.467 kb on + strand, within GFF498 at 529.491 kb on + strand, within GFF498 at 529.492 kb on - strand, within GFF498 at 529.701 kb on + strand, within GFF498 at 529.702 kb on - strand, within GFF498 at 529.740 kb on + strand, within GFF498 at 529.740 kb on + strand, within GFF498 at 529.977 kb on + strand, within GFF498 at 529.977 kb on + strand, within GFF498 at 529.977 kb on + strand, within GFF498 at 529.977 kb on + strand, within GFF498 at 529.978 kb on - strand, within GFF498 at 529.978 kb on - strand, within GFF498 at 530.019 kb on + strand, within GFF498 at 530.019 kb on + strand, within GFF498 at 530.019 kb on + strand, within GFF498 at 530.019 kb on + strand, within GFF498 at 530.019 kb on + strand, within GFF498 at 530.052 kb on + strand, within GFF498 at 530.052 kb on + strand, within GFF498 at 530.052 kb on + strand, within GFF498 at 530.052 kb on + strand, within GFF498 at 530.053 kb on - strand, within GFF498 at 530.218 kb on + strand at 530.219 kb on - strand at 530.291 kb on - strand at 530.359 kb on + strand at 530.359 kb on + strand at 530.359 kb on + strand at 530.360 kb on - strand at 530.360 kb on - strand at 530.407 kb on + strand at 530.604 kb on - strand at 531.020 kb on + strand, within GFF499 at 531.021 kb on - strand, within GFF499
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 528,115 + -0.8 528,115 + -0.6 528,116 - -0.3 528,125 + +0.6 528,126 + -0.5 528,127 - +0.1 528,281 + +0.1 528,281 + -0.3 528,281 + -0.2 528,282 - -0.5 528,340 + +0.9 528,341 - -0.3 528,681 + GFF497 0.52 +0.7 528,681 + GFF497 0.52 +2.2 528,681 + GFF497 0.52 -0.1 528,681 + GFF497 0.52 -0.8 528,681 + GFF497 0.52 +0.1 528,694 - GFF497 0.54 -0.8 528,797 + GFF497 0.67 -0.3 528,798 - GFF497 0.67 -1.5 529,190 - GFF498 0.11 +0.2 529,272 + GFF498 0.18 +0.3 529,467 + GFF498 0.35 -0.2 529,491 + GFF498 0.37 -0.2 529,492 - GFF498 0.37 -0.7 529,701 + GFF498 0.55 +0.8 529,702 - GFF498 0.55 -0.7 529,740 + GFF498 0.59 -0.6 529,740 + GFF498 0.59 -0.5 529,977 + GFF498 0.79 +1.3 529,977 + GFF498 0.79 +0.4 529,977 + GFF498 0.79 +0.7 529,977 + GFF498 0.79 +0.5 529,978 - GFF498 0.79 -0.1 529,978 - GFF498 0.79 +0.1 530,019 + GFF498 0.83 +0.1 530,019 + GFF498 0.83 -0.2 530,019 + GFF498 0.83 -0.2 530,019 + GFF498 0.83 +0.6 530,019 + GFF498 0.83 +0.4 530,052 + GFF498 0.86 -1.0 530,052 + GFF498 0.86 -0.7 530,052 + GFF498 0.86 +0.6 530,052 + GFF498 0.86 +0.7 530,053 - GFF498 0.86 -0.2 530,218 + +0.9 530,219 - +0.7 530,291 - -0.6 530,359 + +0.1 530,359 + +0.5 530,359 + +0.7 530,360 - -0.2 530,360 - -0.1 530,407 + +0.8 530,604 - +1.1 531,020 + GFF499 0.74 -0.5 531,021 - GFF499 0.74 -0.3
Or see this region's nucleotide sequence