Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF493 and GFF494 are separated by 39 nucleotides GFF494 and GFF495 are separated by 32 nucleotides GFF495 and GFF496 overlap by 4 nucleotides
GFF493 - hypothetical protein, at 524,257 to 524,613
GFF493
GFF494 - Carnitinyl-CoA dehydratase, at 524,653 to 525,447
GFF494
GFF495 - hypothetical protein, at 525,480 to 526,643
GFF495
GFF496 - Long-chain-fatty-acid--CoA ligase, at 526,640 to 528,196
GFF496
Position (kb) 525
526
527 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 524.736 kb on - strand, within GFF494 at 524.797 kb on + strand, within GFF494 at 524.797 kb on + strand, within GFF494 at 524.797 kb on + strand, within GFF494 at 524.798 kb on - strand, within GFF494 at 524.798 kb on - strand, within GFF494 at 524.798 kb on - strand, within GFF494 at 524.852 kb on + strand, within GFF494 at 524.853 kb on - strand, within GFF494 at 524.853 kb on - strand, within GFF494 at 524.853 kb on - strand, within GFF494 at 524.957 kb on + strand, within GFF494 at 525.195 kb on - strand, within GFF494 at 525.195 kb on - strand, within GFF494 at 525.240 kb on + strand, within GFF494 at 525.241 kb on - strand, within GFF494 at 525.242 kb on + strand, within GFF494 at 525.242 kb on + strand, within GFF494 at 525.243 kb on - strand, within GFF494 at 525.243 kb on - strand, within GFF494 at 525.243 kb on - strand, within GFF494 at 525.503 kb on + strand at 525.504 kb on - strand at 525.611 kb on - strand, within GFF495 at 525.611 kb on - strand, within GFF495 at 525.611 kb on - strand, within GFF495 at 525.611 kb on - strand, within GFF495 at 525.611 kb on - strand, within GFF495 at 525.611 kb on - strand, within GFF495 at 525.718 kb on + strand, within GFF495 at 525.841 kb on + strand, within GFF495 at 525.841 kb on + strand, within GFF495 at 526.027 kb on + strand, within GFF495 at 526.027 kb on + strand, within GFF495 at 526.028 kb on - strand, within GFF495 at 526.183 kb on + strand, within GFF495 at 526.183 kb on + strand, within GFF495 at 526.357 kb on + strand, within GFF495 at 526.358 kb on - strand, within GFF495 at 526.358 kb on - strand, within GFF495 at 526.358 kb on - strand, within GFF495 at 526.728 kb on + strand at 526.768 kb on + strand at 526.769 kb on - strand at 526.957 kb on - strand, within GFF496 at 526.957 kb on - strand, within GFF496 at 526.957 kb on - strand, within GFF496 at 526.957 kb on - strand, within GFF496 at 526.982 kb on + strand, within GFF496 at 527.013 kb on + strand, within GFF496 at 527.049 kb on + strand, within GFF496 at 527.049 kb on + strand, within GFF496 at 527.100 kb on + strand, within GFF496 at 527.101 kb on - strand, within GFF496 at 527.284 kb on + strand, within GFF496 at 527.370 kb on + strand, within GFF496 at 527.388 kb on + strand, within GFF496 at 527.389 kb on - strand, within GFF496 at 527.389 kb on - strand, within GFF496 at 527.392 kb on - strand, within GFF496 at 527.486 kb on - strand, within GFF496 at 527.486 kb on - strand, within GFF496 at 527.486 kb on - strand, within GFF496 at 527.486 kb on - strand, within GFF496 at 527.486 kb on - strand, within GFF496 at 527.486 kb on - strand, within GFF496 at 527.491 kb on - strand, within GFF496 at 527.578 kb on - strand, within GFF496 at 527.578 kb on - strand, within GFF496 at 527.578 kb on - strand, within GFF496
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 524,736 - GFF494 0.10 +0.2 524,797 + GFF494 0.18 -0.4 524,797 + GFF494 0.18 +0.4 524,797 + GFF494 0.18 +0.2 524,798 - GFF494 0.18 +0.4 524,798 - GFF494 0.18 +2.1 524,798 - GFF494 0.18 -0.5 524,852 + GFF494 0.25 -0.8 524,853 - GFF494 0.25 -0.8 524,853 - GFF494 0.25 -2.0 524,853 - GFF494 0.25 +0.4 524,957 + GFF494 0.38 +0.1 525,195 - GFF494 0.68 -0.1 525,195 - GFF494 0.68 -0.3 525,240 + GFF494 0.74 +0.6 525,241 - GFF494 0.74 -0.4 525,242 + GFF494 0.74 -0.8 525,242 + GFF494 0.74 +0.1 525,243 - GFF494 0.74 +0.0 525,243 - GFF494 0.74 -0.2 525,243 - GFF494 0.74 +3.0 525,503 + -0.5 525,504 - +0.4 525,611 - GFF495 0.11 +1.2 525,611 - GFF495 0.11 +0.7 525,611 - GFF495 0.11 -0.3 525,611 - GFF495 0.11 +0.2 525,611 - GFF495 0.11 +1.1 525,611 - GFF495 0.11 +1.2 525,718 + GFF495 0.20 +0.9 525,841 + GFF495 0.31 -0.6 525,841 + GFF495 0.31 -0.3 526,027 + GFF495 0.47 -0.4 526,027 + GFF495 0.47 +0.1 526,028 - GFF495 0.47 +0.8 526,183 + GFF495 0.60 +0.0 526,183 + GFF495 0.60 +0.3 526,357 + GFF495 0.75 +0.4 526,358 - GFF495 0.75 -0.1 526,358 - GFF495 0.75 -0.5 526,358 - GFF495 0.75 -0.2 526,728 + -0.0 526,768 + +0.3 526,769 - +0.7 526,957 - GFF496 0.20 -0.9 526,957 - GFF496 0.20 -1.9 526,957 - GFF496 0.20 +0.5 526,957 - GFF496 0.20 +1.2 526,982 + GFF496 0.22 -0.5 527,013 + GFF496 0.24 -0.2 527,049 + GFF496 0.26 -1.8 527,049 + GFF496 0.26 +1.0 527,100 + GFF496 0.30 -0.1 527,101 - GFF496 0.30 -0.8 527,284 + GFF496 0.41 -0.6 527,370 + GFF496 0.47 -1.1 527,388 + GFF496 0.48 +0.2 527,389 - GFF496 0.48 +0.2 527,389 - GFF496 0.48 -1.3 527,392 - GFF496 0.48 -0.6 527,486 - GFF496 0.54 +0.4 527,486 - GFF496 0.54 -0.3 527,486 - GFF496 0.54 +0.5 527,486 - GFF496 0.54 +0.9 527,486 - GFF496 0.54 +0.8 527,486 - GFF496 0.54 -0.9 527,491 - GFF496 0.55 +0.2 527,578 - GFF496 0.60 +0.1 527,578 - GFF496 0.60 -0.0 527,578 - GFF496 0.60 -1.9
Or see this region's nucleotide sequence