Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF492 and GFF493 are separated by 114 nucleotides GFF493 and GFF494 are separated by 39 nucleotides GFF494 and GFF495 are separated by 32 nucleotides
GFF492 - High-affinity branched-chain amino acid transport system permease protein LivH, at 523,246 to 524,142
GFF492
GFF493 - hypothetical protein, at 524,257 to 524,613
GFF493
GFF494 - Carnitinyl-CoA dehydratase, at 524,653 to 525,447
GFF494
GFF495 - hypothetical protein, at 525,480 to 526,643
GFF495
Position (kb) 524
525
526 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 523.710 kb on + strand, within GFF492 at 523.807 kb on - strand, within GFF492 at 523.851 kb on - strand, within GFF492 at 523.910 kb on + strand, within GFF492 at 524.082 kb on + strand at 524.082 kb on + strand at 524.083 kb on - strand at 524.084 kb on + strand at 524.084 kb on + strand at 524.085 kb on - strand at 524.085 kb on - strand at 524.085 kb on - strand at 524.085 kb on - strand at 524.146 kb on - strand at 524.185 kb on + strand at 524.185 kb on + strand at 524.185 kb on + strand at 524.186 kb on - strand at 524.186 kb on - strand at 524.186 kb on - strand at 524.186 kb on - strand at 524.736 kb on - strand, within GFF494 at 524.797 kb on + strand, within GFF494 at 524.797 kb on + strand, within GFF494 at 524.797 kb on + strand, within GFF494 at 524.798 kb on - strand, within GFF494 at 524.798 kb on - strand, within GFF494 at 524.798 kb on - strand, within GFF494 at 524.852 kb on + strand, within GFF494 at 524.853 kb on - strand, within GFF494 at 524.853 kb on - strand, within GFF494 at 524.853 kb on - strand, within GFF494 at 524.957 kb on + strand, within GFF494 at 525.195 kb on - strand, within GFF494 at 525.195 kb on - strand, within GFF494 at 525.240 kb on + strand, within GFF494 at 525.241 kb on - strand, within GFF494 at 525.242 kb on + strand, within GFF494 at 525.242 kb on + strand, within GFF494 at 525.243 kb on - strand, within GFF494 at 525.243 kb on - strand, within GFF494 at 525.243 kb on - strand, within GFF494 at 525.503 kb on + strand at 525.504 kb on - strand at 525.611 kb on - strand, within GFF495 at 525.611 kb on - strand, within GFF495 at 525.611 kb on - strand, within GFF495 at 525.611 kb on - strand, within GFF495 at 525.611 kb on - strand, within GFF495 at 525.611 kb on - strand, within GFF495 at 525.718 kb on + strand, within GFF495 at 525.841 kb on + strand, within GFF495 at 525.841 kb on + strand, within GFF495 at 526.027 kb on + strand, within GFF495 at 526.027 kb on + strand, within GFF495 at 526.028 kb on - strand, within GFF495 at 526.183 kb on + strand, within GFF495 at 526.183 kb on + strand, within GFF495 at 526.357 kb on + strand, within GFF495 at 526.358 kb on - strand, within GFF495 at 526.358 kb on - strand, within GFF495 at 526.358 kb on - strand, within GFF495
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 523,710 + GFF492 0.52 +0.0 523,807 - GFF492 0.63 +0.0 523,851 - GFF492 0.67 +0.0 523,910 + GFF492 0.74 -0.1 524,082 + +0.2 524,082 + +2.2 524,083 - +0.4 524,084 + +0.5 524,084 + -0.9 524,085 - +0.8 524,085 - -0.0 524,085 - +0.4 524,085 - +0.9 524,146 - +0.7 524,185 + +1.3 524,185 + -0.6 524,185 + +1.1 524,186 - -0.5 524,186 - +1.8 524,186 - -0.8 524,186 - -1.4 524,736 - GFF494 0.10 +0.2 524,797 + GFF494 0.18 -0.4 524,797 + GFF494 0.18 +0.4 524,797 + GFF494 0.18 +0.2 524,798 - GFF494 0.18 +0.4 524,798 - GFF494 0.18 +2.1 524,798 - GFF494 0.18 -0.5 524,852 + GFF494 0.25 -0.8 524,853 - GFF494 0.25 -0.8 524,853 - GFF494 0.25 -2.0 524,853 - GFF494 0.25 +0.4 524,957 + GFF494 0.38 +0.1 525,195 - GFF494 0.68 -0.1 525,195 - GFF494 0.68 -0.3 525,240 + GFF494 0.74 +0.6 525,241 - GFF494 0.74 -0.4 525,242 + GFF494 0.74 -0.8 525,242 + GFF494 0.74 +0.1 525,243 - GFF494 0.74 +0.0 525,243 - GFF494 0.74 -0.2 525,243 - GFF494 0.74 +3.0 525,503 + -0.5 525,504 - +0.4 525,611 - GFF495 0.11 +1.2 525,611 - GFF495 0.11 +0.7 525,611 - GFF495 0.11 -0.3 525,611 - GFF495 0.11 +0.2 525,611 - GFF495 0.11 +1.1 525,611 - GFF495 0.11 +1.2 525,718 + GFF495 0.20 +0.9 525,841 + GFF495 0.31 -0.6 525,841 + GFF495 0.31 -0.3 526,027 + GFF495 0.47 -0.4 526,027 + GFF495 0.47 +0.1 526,028 - GFF495 0.47 +0.8 526,183 + GFF495 0.60 +0.0 526,183 + GFF495 0.60 +0.3 526,357 + GFF495 0.75 +0.4 526,358 - GFF495 0.75 -0.1 526,358 - GFF495 0.75 -0.5 526,358 - GFF495 0.75 -0.2
Or see this region's nucleotide sequence