Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4864 and GFF4865 are separated by 24 nucleotides GFF4865 and GFF4866 are separated by 11 nucleotides GFF4866 and GFF4867 are separated by 107 nucleotides GFF4867 and GFF4868 overlap by 11 nucleotides
GFF4864 - FeMo cofactor biosynthesis protein NifB, at 18,440 to 20,014
GFF4864
GFF4865 - Ferredoxin-1, at 20,039 to 20,263
GFF4865
GFF4866 - Protein HesB, vegetative, at 20,275 to 20,589
GFF4866
GFF4867 - hypothetical protein, at 20,697 to 21,248
GFF4867
GFF4868 - hypothetical protein, at 21,238 to 22,020
GFF4868
Position (kb) 20
21 Strain fitness (log2 ratio) -2
-1
0
1
2 at 19.058 kb on + strand, within GFF4864 at 19.058 kb on + strand, within GFF4864 at 19.059 kb on - strand, within GFF4864 at 19.059 kb on - strand, within GFF4864 at 19.059 kb on - strand, within GFF4864 at 19.059 kb on - strand, within GFF4864 at 19.059 kb on - strand, within GFF4864 at 19.059 kb on - strand, within GFF4864 at 19.088 kb on + strand, within GFF4864 at 19.089 kb on - strand, within GFF4864 at 19.097 kb on + strand, within GFF4864 at 19.097 kb on + strand, within GFF4864 at 19.097 kb on + strand, within GFF4864 at 19.097 kb on + strand, within GFF4864 at 19.098 kb on - strand, within GFF4864 at 19.098 kb on - strand, within GFF4864 at 19.098 kb on - strand, within GFF4864 at 19.380 kb on - strand, within GFF4864 at 19.487 kb on + strand, within GFF4864 at 19.487 kb on + strand, within GFF4864 at 19.487 kb on + strand, within GFF4864 at 19.487 kb on + strand, within GFF4864 at 19.488 kb on - strand, within GFF4864 at 19.488 kb on - strand, within GFF4864 at 19.488 kb on - strand, within GFF4864 at 19.511 kb on + strand, within GFF4864 at 19.511 kb on + strand, within GFF4864 at 19.512 kb on - strand, within GFF4864 at 19.733 kb on + strand, within GFF4864 at 19.733 kb on + strand, within GFF4864 at 19.734 kb on - strand, within GFF4864 at 19.734 kb on - strand, within GFF4864 at 19.734 kb on - strand, within GFF4864 at 19.748 kb on + strand, within GFF4864 at 19.749 kb on - strand, within GFF4864 at 19.879 kb on - strand at 19.925 kb on + strand at 19.926 kb on - strand at 20.024 kb on + strand at 20.024 kb on + strand at 20.025 kb on - strand at 20.025 kb on - strand at 20.150 kb on + strand, within GFF4865 at 20.215 kb on + strand, within GFF4865 at 20.215 kb on + strand, within GFF4865 at 20.215 kb on + strand, within GFF4865 at 20.215 kb on + strand, within GFF4865 at 20.215 kb on + strand, within GFF4865 at 20.215 kb on + strand, within GFF4865 at 20.215 kb on + strand, within GFF4865 at 20.216 kb on - strand, within GFF4865 at 20.216 kb on - strand, within GFF4865 at 20.237 kb on + strand, within GFF4865 at 20.459 kb on - strand, within GFF4866 at 20.835 kb on + strand, within GFF4867 at 20.836 kb on - strand, within GFF4867 at 20.836 kb on - strand, within GFF4867 at 20.928 kb on + strand, within GFF4867 at 20.928 kb on + strand, within GFF4867 at 20.929 kb on - strand, within GFF4867 at 20.929 kb on - strand, within GFF4867 at 20.929 kb on - strand, within GFF4867 at 20.934 kb on + strand, within GFF4867 at 20.934 kb on + strand, within GFF4867 at 20.934 kb on + strand, within GFF4867 at 20.934 kb on + strand, within GFF4867 at 20.935 kb on - strand, within GFF4867 at 20.935 kb on - strand, within GFF4867 at 20.935 kb on - strand, within GFF4867 at 21.058 kb on - strand, within GFF4867 at 21.102 kb on + strand, within GFF4867 at 21.102 kb on + strand, within GFF4867 at 21.102 kb on + strand, within GFF4867 at 21.103 kb on - strand, within GFF4867 at 21.103 kb on - strand, within GFF4867 at 21.109 kb on - strand, within GFF4867 at 21.109 kb on - strand, within GFF4867
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 19,058 + GFF4864 0.39 -1.4 19,058 + GFF4864 0.39 +1.1 19,059 - GFF4864 0.39 -0.0 19,059 - GFF4864 0.39 +0.4 19,059 - GFF4864 0.39 -1.3 19,059 - GFF4864 0.39 -0.2 19,059 - GFF4864 0.39 -0.2 19,059 - GFF4864 0.39 -0.6 19,088 + GFF4864 0.41 +0.3 19,089 - GFF4864 0.41 -0.7 19,097 + GFF4864 0.42 +0.3 19,097 + GFF4864 0.42 +0.1 19,097 + GFF4864 0.42 +0.1 19,097 + GFF4864 0.42 -1.4 19,098 - GFF4864 0.42 -0.1 19,098 - GFF4864 0.42 -0.4 19,098 - GFF4864 0.42 -0.8 19,380 - GFF4864 0.60 -1.0 19,487 + GFF4864 0.66 -0.6 19,487 + GFF4864 0.66 -0.5 19,487 + GFF4864 0.66 -0.7 19,487 + GFF4864 0.66 -1.3 19,488 - GFF4864 0.67 -0.5 19,488 - GFF4864 0.67 -0.5 19,488 - GFF4864 0.67 -1.5 19,511 + GFF4864 0.68 -0.0 19,511 + GFF4864 0.68 +1.5 19,512 - GFF4864 0.68 +1.5 19,733 + GFF4864 0.82 +0.0 19,733 + GFF4864 0.82 +0.4 19,734 - GFF4864 0.82 -0.1 19,734 - GFF4864 0.82 +2.4 19,734 - GFF4864 0.82 +0.8 19,748 + GFF4864 0.83 -1.5 19,749 - GFF4864 0.83 +0.1 19,879 - -1.3 19,925 + -0.6 19,926 - -0.1 20,024 + -0.4 20,024 + -0.3 20,025 - +1.9 20,025 - +0.4 20,150 + GFF4865 0.49 -1.5 20,215 + GFF4865 0.78 +1.2 20,215 + GFF4865 0.78 -1.9 20,215 + GFF4865 0.78 +0.4 20,215 + GFF4865 0.78 -0.4 20,215 + GFF4865 0.78 -1.1 20,215 + GFF4865 0.78 -0.9 20,215 + GFF4865 0.78 -0.0 20,216 - GFF4865 0.79 +2.1 20,216 - GFF4865 0.79 -0.4 20,237 + GFF4865 0.88 +0.6 20,459 - GFF4866 0.58 -0.7 20,835 + GFF4867 0.25 +0.7 20,836 - GFF4867 0.25 +0.2 20,836 - GFF4867 0.25 -0.4 20,928 + GFF4867 0.42 -0.8 20,928 + GFF4867 0.42 +0.5 20,929 - GFF4867 0.42 -0.8 20,929 - GFF4867 0.42 +0.2 20,929 - GFF4867 0.42 -0.2 20,934 + GFF4867 0.43 +0.9 20,934 + GFF4867 0.43 -0.4 20,934 + GFF4867 0.43 +0.1 20,934 + GFF4867 0.43 -0.5 20,935 - GFF4867 0.43 +0.6 20,935 - GFF4867 0.43 -0.3 20,935 - GFF4867 0.43 -0.0 21,058 - GFF4867 0.65 +0.1 21,102 + GFF4867 0.73 -0.5 21,102 + GFF4867 0.73 -0.3 21,102 + GFF4867 0.73 +0.4 21,103 - GFF4867 0.74 -0.5 21,103 - GFF4867 0.74 +1.7 21,109 - GFF4867 0.75 -1.4 21,109 - GFF4867 0.75 -0.8
Or see this region's nucleotide sequence