Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4794 and GFF4795 are separated by 37 nucleotides GFF4795 and GFF4796 overlap by 1 nucleotides GFF4796 and GFF4797 overlap by 4 nucleotides GFF4797 and GFF4798 overlap by 1 nucleotides
GFF4794 - hypothetical protein, at 35,125 to 35,496
GFF4794
GFF4795 - Electron transfer flavoprotein subunit alpha, at 35,534 to 36,478
GFF4795
GFF4796 - Electron transfer flavoprotein subunit beta, at 36,478 to 37,227
GFF4796
GFF4797 - Citrate lyase subunit beta-like protein, at 37,224 to 38,063
GFF4797
GFF4798 - Mesaconyl-C(4)-CoA hydratase, at 38,063 to 38,917
GFF4798
Position (kb) 36
37
38 Strain fitness (log2 ratio) -2
-1
0
1
2 at 35.496 kb on + strand at 35.496 kb on + strand at 35.496 kb on + strand at 35.497 kb on - strand at 35.497 kb on - strand at 35.497 kb on - strand at 35.497 kb on - strand at 35.497 kb on - strand at 35.497 kb on - strand at 35.543 kb on - strand at 35.553 kb on - strand at 35.604 kb on + strand at 35.604 kb on + strand at 35.718 kb on + strand, within GFF4795 at 35.718 kb on + strand, within GFF4795 at 35.718 kb on + strand, within GFF4795 at 35.718 kb on + strand, within GFF4795 at 35.718 kb on + strand, within GFF4795 at 35.718 kb on + strand, within GFF4795 at 35.719 kb on - strand, within GFF4795 at 35.719 kb on - strand, within GFF4795 at 35.719 kb on - strand, within GFF4795 at 35.719 kb on - strand, within GFF4795 at 35.719 kb on - strand, within GFF4795 at 35.719 kb on - strand, within GFF4795 at 35.719 kb on - strand, within GFF4795 at 35.719 kb on - strand, within GFF4795 at 35.719 kb on - strand, within GFF4795 at 35.719 kb on - strand, within GFF4795 at 35.721 kb on - strand, within GFF4795 at 35.775 kb on + strand, within GFF4795 at 35.775 kb on + strand, within GFF4795 at 35.776 kb on - strand, within GFF4795 at 35.776 kb on - strand, within GFF4795 at 36.096 kb on + strand, within GFF4795 at 36.096 kb on + strand, within GFF4795 at 36.096 kb on + strand, within GFF4795 at 36.096 kb on + strand, within GFF4795 at 36.096 kb on + strand, within GFF4795 at 36.096 kb on + strand, within GFF4795 at 36.096 kb on + strand, within GFF4795 at 36.096 kb on + strand, within GFF4795 at 36.096 kb on + strand, within GFF4795 at 36.097 kb on - strand, within GFF4795 at 36.097 kb on - strand, within GFF4795 at 36.097 kb on - strand, within GFF4795 at 36.228 kb on + strand, within GFF4795 at 36.229 kb on - strand, within GFF4795 at 36.229 kb on - strand, within GFF4795 at 36.229 kb on - strand, within GFF4795 at 36.229 kb on - strand, within GFF4795 at 36.285 kb on + strand, within GFF4795 at 36.285 kb on + strand, within GFF4795 at 36.285 kb on + strand, within GFF4795 at 36.285 kb on + strand, within GFF4795 at 36.286 kb on - strand, within GFF4795 at 36.286 kb on - strand, within GFF4795 at 36.286 kb on - strand, within GFF4795 at 36.286 kb on - strand, within GFF4795 at 36.675 kb on - strand, within GFF4796 at 36.675 kb on - strand, within GFF4796 at 37.182 kb on + strand at 37.182 kb on + strand at 37.182 kb on + strand at 37.483 kb on + strand, within GFF4797 at 37.484 kb on - strand, within GFF4797 at 37.484 kb on - strand, within GFF4797 at 37.484 kb on - strand, within GFF4797 at 37.526 kb on + strand, within GFF4797 at 37.527 kb on - strand, within GFF4797 at 37.661 kb on + strand, within GFF4797 at 37.662 kb on - strand, within GFF4797 at 37.662 kb on - strand, within GFF4797 at 38.086 kb on + strand at 38.086 kb on + strand at 38.086 kb on + strand at 38.087 kb on - strand at 38.087 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 35,496 + -1.6 35,496 + +0.8 35,496 + -1.6 35,497 - -1.5 35,497 - +1.0 35,497 - -1.6 35,497 - -1.0 35,497 - -0.6 35,497 - -0.2 35,543 - -0.5 35,553 - -0.7 35,604 + -0.7 35,604 + -0.7 35,718 + GFF4795 0.19 +0.3 35,718 + GFF4795 0.19 -0.5 35,718 + GFF4795 0.19 +0.1 35,718 + GFF4795 0.19 +0.3 35,718 + GFF4795 0.19 -1.0 35,718 + GFF4795 0.19 +0.7 35,719 - GFF4795 0.20 +0.8 35,719 - GFF4795 0.20 +0.3 35,719 - GFF4795 0.20 -0.0 35,719 - GFF4795 0.20 +2.0 35,719 - GFF4795 0.20 +1.6 35,719 - GFF4795 0.20 +0.3 35,719 - GFF4795 0.20 +0.1 35,719 - GFF4795 0.20 +1.3 35,719 - GFF4795 0.20 +0.6 35,719 - GFF4795 0.20 -0.8 35,721 - GFF4795 0.20 -1.4 35,775 + GFF4795 0.26 -1.1 35,775 + GFF4795 0.26 +0.4 35,776 - GFF4795 0.26 +0.1 35,776 - GFF4795 0.26 -0.4 36,096 + GFF4795 0.59 -1.9 36,096 + GFF4795 0.59 +0.0 36,096 + GFF4795 0.59 -0.1 36,096 + GFF4795 0.59 -0.9 36,096 + GFF4795 0.59 +1.0 36,096 + GFF4795 0.59 +0.5 36,096 + GFF4795 0.59 -0.4 36,096 + GFF4795 0.59 -0.0 36,096 + GFF4795 0.59 -0.4 36,097 - GFF4795 0.60 +0.1 36,097 - GFF4795 0.60 +0.4 36,097 - GFF4795 0.60 -0.9 36,228 + GFF4795 0.73 +0.3 36,229 - GFF4795 0.74 +0.4 36,229 - GFF4795 0.74 -0.3 36,229 - GFF4795 0.74 +0.6 36,229 - GFF4795 0.74 +1.3 36,285 + GFF4795 0.79 +0.1 36,285 + GFF4795 0.79 -0.6 36,285 + GFF4795 0.79 -0.9 36,285 + GFF4795 0.79 +0.2 36,286 - GFF4795 0.80 +0.4 36,286 - GFF4795 0.80 -0.3 36,286 - GFF4795 0.80 +1.7 36,286 - GFF4795 0.80 +1.0 36,675 - GFF4796 0.26 -1.1 36,675 - GFF4796 0.26 -0.0 37,182 + +0.4 37,182 + -0.4 37,182 + +0.3 37,483 + GFF4797 0.31 -0.4 37,484 - GFF4797 0.31 +2.6 37,484 - GFF4797 0.31 -0.0 37,484 - GFF4797 0.31 -0.5 37,526 + GFF4797 0.36 -0.9 37,527 - GFF4797 0.36 +0.1 37,661 + GFF4797 0.52 +0.2 37,662 - GFF4797 0.52 -0.4 37,662 - GFF4797 0.52 +0.8 38,086 + -1.7 38,086 + -0.1 38,086 + -1.1 38,087 - +0.4 38,087 - -0.9
Or see this region's nucleotide sequence