Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4720 and GFF4721 are separated by 289 nucleotides GFF4721 and GFF4722 are separated by 97 nucleotides GFF4722 and GFF4723 are separated by 97 nucleotides
GFF4720 - hypothetical protein, at 132,244 to 132,426
GFF4720
GFF4721 - hypothetical protein, at 132,716 to 133,117
GFF4721
GFF4722 - 50S ribosomal protein L31, at 133,215 to 133,439
GFF4722
GFF4723 - Multidrug resistance ABC transporter ATP-binding/permease protein BmrA, at 133,537 to 135,351
GFF4723
Position (kb) 133
134 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 132.220 kb on + strand at 132.220 kb on + strand at 132.424 kb on + strand at 132.424 kb on + strand at 132.515 kb on - strand at 132.644 kb on + strand at 132.645 kb on - strand at 132.645 kb on - strand at 132.651 kb on + strand at 132.652 kb on - strand at 132.652 kb on - strand at 132.652 kb on - strand at 132.664 kb on + strand at 133.454 kb on - strand at 133.520 kb on - strand at 133.643 kb on - strand at 133.786 kb on + strand, within GFF4723 at 133.934 kb on - strand, within GFF4723 at 134.204 kb on - strand, within GFF4723
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 132,220 + -0.6 132,220 + -0.7 132,424 + +0.4 132,424 + +0.0 132,515 - -1.2 132,644 + +0.2 132,645 - -0.4 132,645 - -0.2 132,651 + -0.3 132,652 - +0.4 132,652 - -0.3 132,652 - +1.4 132,664 + -0.4 133,454 - +0.4 133,520 - -0.4 133,643 - -1.2 133,786 + GFF4723 0.14 -0.3 133,934 - GFF4723 0.22 +0.4 134,204 - GFF4723 0.37 -2.8
Or see this region's nucleotide sequence