Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4719 and GFF4720 are separated by 142 nucleotides GFF4720 and GFF4721 are separated by 289 nucleotides GFF4721 and GFF4722 are separated by 97 nucleotides
GFF4719 - Quinone oxidoreductase 1, at 131,091 to 132,101
GFF4719
GFF4720 - hypothetical protein, at 132,244 to 132,426
GFF4720
GFF4721 - hypothetical protein, at 132,716 to 133,117
GFF4721
GFF4722 - 50S ribosomal protein L31, at 133,215 to 133,439
GFF4722
Position (kb) 132
133 Strain fitness (log2 ratio) -1
0
1 at 131.398 kb on + strand, within GFF4719 at 131.399 kb on - strand, within GFF4719 at 131.413 kb on + strand, within GFF4719 at 131.414 kb on - strand, within GFF4719 at 131.500 kb on + strand, within GFF4719 at 131.500 kb on + strand, within GFF4719 at 131.500 kb on + strand, within GFF4719 at 131.782 kb on + strand, within GFF4719 at 131.783 kb on - strand, within GFF4719 at 131.836 kb on + strand, within GFF4719 at 132.164 kb on - strand at 132.220 kb on + strand at 132.220 kb on + strand at 132.424 kb on + strand at 132.424 kb on + strand at 132.515 kb on - strand at 132.644 kb on + strand at 132.645 kb on - strand at 132.645 kb on - strand at 132.651 kb on + strand at 132.652 kb on - strand at 132.652 kb on - strand at 132.652 kb on - strand at 132.664 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 131,398 + GFF4719 0.30 +0.1 131,399 - GFF4719 0.30 +1.4 131,413 + GFF4719 0.32 +0.8 131,414 - GFF4719 0.32 +0.3 131,500 + GFF4719 0.40 +0.7 131,500 + GFF4719 0.40 -0.6 131,500 + GFF4719 0.40 -0.8 131,782 + GFF4719 0.68 +1.2 131,783 - GFF4719 0.68 -0.4 131,836 + GFF4719 0.74 -0.5 132,164 - -0.2 132,220 + -0.6 132,220 + -0.7 132,424 + +0.4 132,424 + +0.0 132,515 - -1.2 132,644 + +0.2 132,645 - -0.4 132,645 - -0.2 132,651 + -0.3 132,652 - +0.4 132,652 - -0.3 132,652 - +1.4 132,664 + -0.4
Or see this region's nucleotide sequence