Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF470 and GFF471 are separated by 180 nucleotides GFF471 and GFF472 are separated by 1 nucleotides GFF472 and GFF473 are separated by 28 nucleotides
GFF470 - High-affinity branched-chain amino acid transport system permease protein LivH, at 496,250 to 497,131
GFF470
GFF471 - hypothetical protein, at 497,312 to 498,247
GFF471
GFF472 - hypothetical protein, at 498,249 to 499,202
GFF472
GFF473 - Leu/Ile/Val-binding protein, at 499,231 to 500,421
GFF473
Position (kb) 497
498
499 Strain fitness (log2 ratio) -2
-1
0
1
2 at 496.339 kb on + strand, within GFF470 at 496.356 kb on + strand, within GFF470 at 496.356 kb on + strand, within GFF470 at 496.356 kb on + strand, within GFF470 at 496.356 kb on + strand, within GFF470 at 496.356 kb on + strand, within GFF470 at 496.356 kb on + strand, within GFF470 at 496.356 kb on + strand, within GFF470 at 496.356 kb on + strand, within GFF470 at 496.357 kb on - strand, within GFF470 at 496.357 kb on - strand, within GFF470 at 496.357 kb on - strand, within GFF470 at 496.482 kb on + strand, within GFF470 at 496.765 kb on - strand, within GFF470 at 497.070 kb on + strand at 497.070 kb on + strand at 497.071 kb on - strand at 497.071 kb on - strand at 497.514 kb on + strand, within GFF471 at 497.514 kb on + strand, within GFF471 at 497.541 kb on + strand, within GFF471 at 497.610 kb on + strand, within GFF471 at 497.610 kb on + strand, within GFF471 at 497.610 kb on + strand, within GFF471 at 497.611 kb on - strand, within GFF471 at 497.611 kb on - strand, within GFF471 at 497.757 kb on + strand, within GFF471 at 497.757 kb on + strand, within GFF471 at 497.757 kb on + strand, within GFF471 at 497.757 kb on + strand, within GFF471 at 497.757 kb on + strand, within GFF471 at 497.758 kb on - strand, within GFF471 at 497.758 kb on - strand, within GFF471 at 497.823 kb on + strand, within GFF471 at 497.823 kb on + strand, within GFF471 at 497.824 kb on - strand, within GFF471 at 497.881 kb on - strand, within GFF471 at 498.135 kb on + strand, within GFF471 at 498.135 kb on + strand, within GFF471 at 498.135 kb on + strand, within GFF471 at 498.136 kb on - strand, within GFF471 at 498.342 kb on + strand at 498.388 kb on + strand, within GFF472 at 498.389 kb on - strand, within GFF472 at 498.389 kb on - strand, within GFF472 at 498.389 kb on - strand, within GFF472 at 498.556 kb on + strand, within GFF472 at 498.556 kb on + strand, within GFF472 at 498.557 kb on - strand, within GFF472 at 498.598 kb on + strand, within GFF472 at 498.598 kb on + strand, within GFF472 at 498.599 kb on - strand, within GFF472 at 499.006 kb on + strand, within GFF472 at 499.006 kb on + strand, within GFF472 at 499.007 kb on - strand, within GFF472 at 499.007 kb on - strand, within GFF472 at 499.007 kb on - strand, within GFF472 at 499.238 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 496,339 + GFF470 0.10 -0.1 496,356 + GFF470 0.12 +0.4 496,356 + GFF470 0.12 +0.7 496,356 + GFF470 0.12 -0.3 496,356 + GFF470 0.12 -0.3 496,356 + GFF470 0.12 +0.7 496,356 + GFF470 0.12 -0.4 496,356 + GFF470 0.12 -0.1 496,356 + GFF470 0.12 -1.2 496,357 - GFF470 0.12 -1.8 496,357 - GFF470 0.12 +0.8 496,357 - GFF470 0.12 -0.1 496,482 + GFF470 0.26 -0.5 496,765 - GFF470 0.58 +0.5 497,070 + +0.2 497,070 + -0.4 497,071 - +1.2 497,071 - -0.8 497,514 + GFF471 0.22 -0.9 497,514 + GFF471 0.22 -0.2 497,541 + GFF471 0.24 -0.5 497,610 + GFF471 0.32 +0.5 497,610 + GFF471 0.32 +0.5 497,610 + GFF471 0.32 -0.5 497,611 - GFF471 0.32 +0.3 497,611 - GFF471 0.32 +0.1 497,757 + GFF471 0.48 -0.1 497,757 + GFF471 0.48 -0.4 497,757 + GFF471 0.48 +0.6 497,757 + GFF471 0.48 -0.3 497,757 + GFF471 0.48 +1.8 497,758 - GFF471 0.48 +0.2 497,758 - GFF471 0.48 -0.7 497,823 + GFF471 0.55 -0.6 497,823 + GFF471 0.55 +1.0 497,824 - GFF471 0.55 +0.2 497,881 - GFF471 0.61 +0.6 498,135 + GFF471 0.88 +1.8 498,135 + GFF471 0.88 -0.7 498,135 + GFF471 0.88 -0.1 498,136 - GFF471 0.88 -0.6 498,342 + -0.6 498,388 + GFF472 0.15 +0.4 498,389 - GFF472 0.15 -0.6 498,389 - GFF472 0.15 -0.8 498,389 - GFF472 0.15 -0.1 498,556 + GFF472 0.32 +0.0 498,556 + GFF472 0.32 +1.2 498,557 - GFF472 0.32 -1.0 498,598 + GFF472 0.37 +0.1 498,598 + GFF472 0.37 +0.1 498,599 - GFF472 0.37 -0.5 499,006 + GFF472 0.79 +0.8 499,006 + GFF472 0.79 +0.4 499,007 - GFF472 0.79 +0.1 499,007 - GFF472 0.79 -0.1 499,007 - GFF472 0.79 -0.1 499,238 + -0.1
Or see this region's nucleotide sequence