Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4615 and GFF4616 are separated by 154 nucleotides GFF4616 and GFF4617 are separated by 108 nucleotides
GFF4615 - hypothetical protein, at 23,247 to 24,950
GFF4615
GFF4616 - Protein YrdA, at 25,105 to 25,635
GFF4616
GFF4617 - hypothetical protein, at 25,744 to 26,412
GFF4617
Position (kb) 25
26 Strain fitness (log2 ratio) -2
-1
0
1
2 at 24.146 kb on + strand, within GFF4615 at 24.350 kb on - strand, within GFF4615 at 24.478 kb on + strand, within GFF4615 at 24.478 kb on + strand, within GFF4615 at 24.478 kb on + strand, within GFF4615 at 24.479 kb on - strand, within GFF4615 at 24.479 kb on - strand, within GFF4615 at 24.682 kb on + strand, within GFF4615 at 24.700 kb on + strand, within GFF4615 at 24.701 kb on - strand, within GFF4615 at 24.746 kb on - strand, within GFF4615 at 24.869 kb on - strand at 24.892 kb on + strand at 24.901 kb on + strand at 24.901 kb on + strand at 24.902 kb on - strand at 24.902 kb on - strand at 25.019 kb on + strand at 25.020 kb on - strand at 25.020 kb on - strand at 25.498 kb on + strand, within GFF4616 at 26.018 kb on + strand, within GFF4617 at 26.018 kb on + strand, within GFF4617 at 26.018 kb on + strand, within GFF4617 at 26.018 kb on + strand, within GFF4617 at 26.018 kb on + strand, within GFF4617 at 26.019 kb on - strand, within GFF4617 at 26.075 kb on + strand, within GFF4617 at 26.228 kb on + strand, within GFF4617 at 26.228 kb on + strand, within GFF4617 at 26.247 kb on + strand, within GFF4617 at 26.248 kb on - strand, within GFF4617 at 26.248 kb on - strand, within GFF4617 at 26.248 kb on - strand, within GFF4617 at 26.248 kb on - strand, within GFF4617 at 26.366 kb on - strand at 26.366 kb on - strand at 26.366 kb on - strand at 26.445 kb on + strand at 26.613 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 24,146 + GFF4615 0.53 +1.5 24,350 - GFF4615 0.65 -1.0 24,478 + GFF4615 0.72 -0.2 24,478 + GFF4615 0.72 -0.3 24,478 + GFF4615 0.72 +0.2 24,479 - GFF4615 0.72 -0.8 24,479 - GFF4615 0.72 -0.6 24,682 + GFF4615 0.84 +1.2 24,700 + GFF4615 0.85 -0.3 24,701 - GFF4615 0.85 +0.5 24,746 - GFF4615 0.88 -0.5 24,869 - +0.6 24,892 + -1.2 24,901 + +0.6 24,901 + +0.7 24,902 - +2.0 24,902 - +1.5 25,019 + +0.2 25,020 - -0.0 25,020 - +0.1 25,498 + GFF4616 0.74 -0.4 26,018 + GFF4617 0.41 -0.3 26,018 + GFF4617 0.41 +0.9 26,018 + GFF4617 0.41 +0.1 26,018 + GFF4617 0.41 -0.4 26,018 + GFF4617 0.41 -0.6 26,019 - GFF4617 0.41 -0.8 26,075 + GFF4617 0.49 +0.2 26,228 + GFF4617 0.72 +0.5 26,228 + GFF4617 0.72 -0.3 26,247 + GFF4617 0.75 +0.1 26,248 - GFF4617 0.75 -0.4 26,248 - GFF4617 0.75 -1.8 26,248 - GFF4617 0.75 +0.5 26,248 - GFF4617 0.75 +0.7 26,366 - -2.6 26,366 - +0.6 26,366 - +1.7 26,445 + -0.2 26,613 - +0.4
Or see this region's nucleotide sequence