Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF457 and GFF458 are separated by 155 nucleotides GFF458 and GFF459 are separated by 50 nucleotides
GFF457 - hypothetical protein, at 485,598 to 486,644
GFF457
GFF458 - hypothetical protein, at 486,800 to 487,543
GFF458
GFF459 - hypothetical protein, at 487,594 to 488,688
GFF459
Position (kb) 486
487
488 Strain fitness (log2 ratio) -1
0
1
2 at 485.806 kb on + strand, within GFF457 at 485.807 kb on - strand, within GFF457 at 485.807 kb on - strand, within GFF457 at 485.807 kb on - strand, within GFF457 at 485.807 kb on - strand, within GFF457 at 485.810 kb on - strand, within GFF457 at 485.810 kb on - strand, within GFF457 at 485.810 kb on - strand, within GFF457 at 485.938 kb on + strand, within GFF457 at 485.938 kb on + strand, within GFF457 at 485.939 kb on - strand, within GFF457 at 486.169 kb on + strand, within GFF457 at 486.169 kb on + strand, within GFF457 at 486.170 kb on - strand, within GFF457 at 486.260 kb on - strand, within GFF457 at 486.358 kb on + strand, within GFF457 at 486.358 kb on + strand, within GFF457 at 486.358 kb on + strand, within GFF457 at 486.359 kb on - strand, within GFF457 at 486.359 kb on - strand, within GFF457 at 486.359 kb on - strand, within GFF457 at 486.497 kb on - strand, within GFF457 at 486.497 kb on - strand, within GFF457 at 486.660 kb on - strand at 487.067 kb on + strand, within GFF458 at 487.067 kb on + strand, within GFF458 at 487.068 kb on - strand, within GFF458 at 487.184 kb on - strand, within GFF458 at 487.541 kb on + strand at 487.542 kb on - strand at 488.136 kb on + strand, within GFF459 at 488.136 kb on + strand, within GFF459 at 488.136 kb on + strand, within GFF459 at 488.137 kb on - strand, within GFF459 at 488.297 kb on + strand, within GFF459 at 488.298 kb on - strand, within GFF459 at 488.298 kb on - strand, within GFF459 at 488.347 kb on + strand, within GFF459 at 488.360 kb on + strand, within GFF459 at 488.360 kb on + strand, within GFF459 at 488.361 kb on - strand, within GFF459
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 485,806 + GFF457 0.20 -0.8 485,807 - GFF457 0.20 +0.5 485,807 - GFF457 0.20 -0.0 485,807 - GFF457 0.20 +0.5 485,807 - GFF457 0.20 +0.4 485,810 - GFF457 0.20 -0.4 485,810 - GFF457 0.20 -0.2 485,810 - GFF457 0.20 -0.6 485,938 + GFF457 0.32 -0.6 485,938 + GFF457 0.32 -0.5 485,939 - GFF457 0.33 -1.6 486,169 + GFF457 0.55 +2.0 486,169 + GFF457 0.55 -0.4 486,170 - GFF457 0.55 -1.3 486,260 - GFF457 0.63 -0.7 486,358 + GFF457 0.73 -0.2 486,358 + GFF457 0.73 -0.4 486,358 + GFF457 0.73 -0.3 486,359 - GFF457 0.73 +1.0 486,359 - GFF457 0.73 -0.1 486,359 - GFF457 0.73 -1.2 486,497 - GFF457 0.86 -0.4 486,497 - GFF457 0.86 +0.6 486,660 - +0.3 487,067 + GFF458 0.36 -0.0 487,067 + GFF458 0.36 +0.3 487,068 - GFF458 0.36 +0.9 487,184 - GFF458 0.52 +2.4 487,541 + -0.6 487,542 - +0.3 488,136 + GFF459 0.49 +1.2 488,136 + GFF459 0.49 +1.4 488,136 + GFF459 0.49 +0.5 488,137 - GFF459 0.50 +0.4 488,297 + GFF459 0.64 -0.2 488,298 - GFF459 0.64 +0.4 488,298 - GFF459 0.64 -0.6 488,347 + GFF459 0.69 -0.2 488,360 + GFF459 0.70 +0.7 488,360 + GFF459 0.70 -0.5 488,361 - GFF459 0.70 -1.2
Or see this region's nucleotide sequence