Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4520 and GFF4521 overlap by 4 nucleotides GFF4521 and GFF4522 are separated by 319 nucleotides
GFF4520 - Protein-glutamate methylesterase/protein-glutamine glutaminase, at 93,769 to 94,914
GFF4520
GFF4521 - Chemotaxis protein methyltransferase 1, at 94,911 to 95,756
GFF4521
GFF4522 - Flagellar transcriptional regulator FtcR, at 96,076 to 96,747
GFF4522
Position (kb) 94
95
96 Strain fitness (log2 ratio) -2
-1
0
1
2 at 94.120 kb on + strand, within GFF4520 at 94.120 kb on + strand, within GFF4520 at 94.120 kb on + strand, within GFF4520 at 94.121 kb on - strand, within GFF4520 at 94.318 kb on + strand, within GFF4520 at 94.318 kb on + strand, within GFF4520 at 94.319 kb on - strand, within GFF4520 at 94.408 kb on + strand, within GFF4520 at 94.409 kb on - strand, within GFF4520 at 94.409 kb on - strand, within GFF4520 at 94.409 kb on - strand, within GFF4520 at 94.410 kb on + strand, within GFF4520 at 94.410 kb on + strand, within GFF4520 at 94.411 kb on - strand, within GFF4520 at 94.549 kb on + strand, within GFF4520 at 94.550 kb on - strand, within GFF4520 at 94.550 kb on - strand, within GFF4520 at 94.684 kb on + strand, within GFF4520 at 94.684 kb on + strand, within GFF4520 at 94.684 kb on + strand, within GFF4520 at 94.992 kb on + strand at 94.992 kb on + strand at 94.992 kb on + strand at 94.992 kb on + strand at 94.993 kb on - strand at 94.993 kb on - strand at 94.993 kb on - strand at 94.993 kb on - strand at 95.262 kb on + strand, within GFF4521 at 95.263 kb on - strand, within GFF4521 at 95.376 kb on + strand, within GFF4521 at 95.376 kb on + strand, within GFF4521 at 95.376 kb on + strand, within GFF4521 at 95.377 kb on - strand, within GFF4521 at 95.377 kb on - strand, within GFF4521 at 95.377 kb on - strand, within GFF4521 at 95.428 kb on - strand, within GFF4521 at 95.428 kb on - strand, within GFF4521 at 95.428 kb on - strand, within GFF4521 at 95.487 kb on + strand, within GFF4521 at 95.528 kb on + strand, within GFF4521 at 95.529 kb on - strand, within GFF4521 at 95.529 kb on - strand, within GFF4521 at 95.565 kb on + strand, within GFF4521 at 95.566 kb on - strand, within GFF4521 at 95.709 kb on + strand at 95.709 kb on + strand at 95.709 kb on + strand at 95.710 kb on - strand at 95.896 kb on + strand at 95.897 kb on - strand at 95.897 kb on - strand at 96.016 kb on + strand at 96.072 kb on + strand at 96.079 kb on + strand at 96.079 kb on + strand at 96.262 kb on + strand, within GFF4522 at 96.262 kb on + strand, within GFF4522 at 96.263 kb on - strand, within GFF4522 at 96.263 kb on - strand, within GFF4522 at 96.263 kb on - strand, within GFF4522 at 96.483 kb on - strand, within GFF4522 at 96.553 kb on + strand, within GFF4522 at 96.553 kb on + strand, within GFF4522 at 96.554 kb on - strand, within GFF4522 at 96.555 kb on + strand, within GFF4522 at 96.610 kb on + strand, within GFF4522 at 96.610 kb on + strand, within GFF4522 at 96.610 kb on + strand, within GFF4522 at 96.611 kb on - strand, within GFF4522 at 96.611 kb on - strand, within GFF4522 at 96.611 kb on - strand, within GFF4522 at 96.611 kb on - strand, within GFF4522 at 96.722 kb on - strand at 96.731 kb on - strand at 96.736 kb on + strand at 96.737 kb on - strand at 96.737 kb on - strand at 96.737 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 94,120 + GFF4520 0.31 +1.5 94,120 + GFF4520 0.31 +0.9 94,120 + GFF4520 0.31 +0.0 94,121 - GFF4520 0.31 +1.9 94,318 + GFF4520 0.48 +1.2 94,318 + GFF4520 0.48 -0.9 94,319 - GFF4520 0.48 +0.0 94,408 + GFF4520 0.56 +1.3 94,409 - GFF4520 0.56 +0.9 94,409 - GFF4520 0.56 +1.0 94,409 - GFF4520 0.56 +0.6 94,410 + GFF4520 0.56 +0.8 94,410 + GFF4520 0.56 +1.6 94,411 - GFF4520 0.56 +1.3 94,549 + GFF4520 0.68 +1.3 94,550 - GFF4520 0.68 +0.7 94,550 - GFF4520 0.68 +1.3 94,684 + GFF4520 0.80 +0.1 94,684 + GFF4520 0.80 -0.9 94,684 + GFF4520 0.80 +1.1 94,992 + -1.1 94,992 + -0.3 94,992 + -0.6 94,992 + -0.1 94,993 - -0.6 94,993 - +0.1 94,993 - -1.4 94,993 - +0.1 95,262 + GFF4521 0.41 -0.9 95,263 - GFF4521 0.42 +0.1 95,376 + GFF4521 0.55 -2.2 95,376 + GFF4521 0.55 +0.6 95,376 + GFF4521 0.55 +2.5 95,377 - GFF4521 0.55 -0.0 95,377 - GFF4521 0.55 -0.3 95,377 - GFF4521 0.55 -0.3 95,428 - GFF4521 0.61 -0.5 95,428 - GFF4521 0.61 +0.6 95,428 - GFF4521 0.61 -0.5 95,487 + GFF4521 0.68 +0.4 95,528 + GFF4521 0.73 -0.4 95,529 - GFF4521 0.73 +1.0 95,529 - GFF4521 0.73 +1.4 95,565 + GFF4521 0.77 +0.1 95,566 - GFF4521 0.77 +0.9 95,709 + -0.2 95,709 + +0.3 95,709 + +0.4 95,710 - +0.0 95,896 + +0.4 95,897 - -0.3 95,897 - -1.5 96,016 + -1.9 96,072 + -1.0 96,079 + -1.5 96,079 + +0.2 96,262 + GFF4522 0.28 -1.2 96,262 + GFF4522 0.28 -1.6 96,263 - GFF4522 0.28 -0.9 96,263 - GFF4522 0.28 -0.1 96,263 - GFF4522 0.28 +1.4 96,483 - GFF4522 0.61 -1.2 96,553 + GFF4522 0.71 -0.4 96,553 + GFF4522 0.71 -2.3 96,554 - GFF4522 0.71 -1.9 96,555 + GFF4522 0.71 -0.9 96,610 + GFF4522 0.79 -0.6 96,610 + GFF4522 0.79 +1.0 96,610 + GFF4522 0.79 -2.1 96,611 - GFF4522 0.80 -0.4 96,611 - GFF4522 0.80 +0.3 96,611 - GFF4522 0.80 -1.2 96,611 - GFF4522 0.80 +0.6 96,722 - -1.3 96,731 - -1.4 96,736 + -1.8 96,737 - -1.5 96,737 - -1.2 96,737 - +0.1
Or see this region's nucleotide sequence