Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF445 and GFF446 are separated by 279 nucleotides GFF446 and GFF447 are separated by 8 nucleotides GFF447 and GFF448 are separated by 2 nucleotides
GFF445 - Glutamate/aspartate import solute-binding protein, at 468,683 to 469,582
GFF445
GFF446 - hypothetical protein, at 469,862 to 470,860
GFF446
GFF447 - hypothetical protein, at 470,869 to 471,666
GFF447
GFF448 - Vitamin B12 import ATP-binding protein BtuD, at 471,669 to 472,463
GFF448
Position (kb) 469
470
471 Strain fitness (log2 ratio) -2
-1
0
1 at 468.924 kb on + strand, within GFF445 at 468.925 kb on - strand, within GFF445 at 468.925 kb on - strand, within GFF445 at 468.925 kb on - strand, within GFF445 at 468.951 kb on + strand, within GFF445 at 469.284 kb on + strand, within GFF445 at 469.359 kb on + strand, within GFF445 at 469.389 kb on + strand, within GFF445 at 469.395 kb on + strand, within GFF445 at 469.395 kb on + strand, within GFF445 at 469.396 kb on - strand, within GFF445 at 469.396 kb on - strand, within GFF445 at 470.366 kb on + strand, within GFF446 at 470.366 kb on + strand, within GFF446 at 470.367 kb on - strand, within GFF446 at 470.367 kb on - strand, within GFF446 at 470.367 kb on - strand, within GFF446 at 470.367 kb on - strand, within GFF446 at 470.367 kb on - strand, within GFF446 at 470.367 kb on - strand, within GFF446 at 470.731 kb on - strand, within GFF446 at 470.847 kb on - strand at 470.890 kb on + strand at 470.913 kb on + strand at 470.936 kb on + strand at 470.936 kb on + strand at 470.937 kb on - strand at 470.937 kb on - strand at 470.937 kb on - strand at 470.937 kb on - strand at 470.937 kb on - strand at 471.355 kb on + strand, within GFF447
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 468,924 + GFF445 0.27 +1.0 468,925 - GFF445 0.27 +1.0 468,925 - GFF445 0.27 -0.7 468,925 - GFF445 0.27 +0.5 468,951 + GFF445 0.30 +0.3 469,284 + GFF445 0.67 -0.8 469,359 + GFF445 0.75 -1.3 469,389 + GFF445 0.78 +0.6 469,395 + GFF445 0.79 -0.2 469,395 + GFF445 0.79 +0.0 469,396 - GFF445 0.79 -0.8 469,396 - GFF445 0.79 +1.0 470,366 + GFF446 0.50 -2.1 470,366 + GFF446 0.50 -2.4 470,367 - GFF446 0.51 +0.3 470,367 - GFF446 0.51 +1.1 470,367 - GFF446 0.51 -0.4 470,367 - GFF446 0.51 -2.2 470,367 - GFF446 0.51 -1.5 470,367 - GFF446 0.51 +0.1 470,731 - GFF446 0.87 -0.9 470,847 - +0.2 470,890 + -0.2 470,913 + +0.0 470,936 + +0.9 470,936 + +0.5 470,937 - +0.3 470,937 - +0.5 470,937 - +1.2 470,937 - +0.2 470,937 - +1.3 471,355 + GFF447 0.61 -0.4
Or see this region's nucleotide sequence